ENST00000245796.11 PSD4

Information
Transcript ID
ENST00000245796.11
Genome
hg38
Position
chr2:113,173,971-113,209,391
Strand
+
CDS length
3,171
Amino acid length
1,057
Gene symbol
PSD4
Gene type
protein-coding
Gene description
pleckstrin and Sec7 domain containing 4
Gene Entrez Gene ID
23550
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 113,173,971 113,174,054
2 113,182,346 113,183,512
3 113,184,957 113,185,073
4 113,185,365 113,185,440
5 113,185,877 113,186,255
6 113,192,380 113,192,589
7 113,193,048 113,193,128
8 113,193,258 113,193,370
9 113,193,592 113,193,650
10 113,193,859 113,193,948
11 113,195,727 113,195,770
12 113,196,147 113,196,307
13 113,197,564 113,197,634
14 113,197,747 113,197,913
15 113,198,740 113,198,884
16 113,199,083 113,199,226
17 113,201,158 113,209,391
CDS
Exon number Type Start Stop
2 CDS 113,182,457 113,183,512
3 CDS 113,184,957 113,185,073
4 CDS 113,185,365 113,185,440
5 CDS 113,185,877 113,186,255
6 CDS 113,192,380 113,192,589
7 CDS 113,193,048 113,193,128
8 CDS 113,193,258 113,193,370
9 CDS 113,193,592 113,193,650
10 CDS 113,193,859 113,193,948
11 CDS 113,195,727 113,195,770
12 CDS 113,196,147 113,196,307
13 CDS 113,197,564 113,197,634
14 CDS 113,197,747 113,197,913
15 CDS 113,198,740 113,198,884
16 CDS 113,199,083 113,199,226
17 CDS 113,201,158 113,201,415
Other genome
Genome Chromosome Start End Links
hg19 chr2 113,931,548 113,966,968 Link
CDS sequence
ATGATGGGTGACTACAGACTCCCTGACCACCCCCAGCCCATGGAAATTCTCAACCTGTACTTGGGAGACAGCCTGGAGCCCCACCCAGGAGAGTGCCCAAGGGAAACGTGCAGCCATGAGGATCCACCGGAGCCTTTCGAGGAGCAAACCTGGGCCACTGACCCTCCTGAACCTACCAGACAAAATGTTCCTCCCTGGGGCTCCGGTGTGGAGCTCACACACCTGGGGAGCTGGGTCCATCAGGACGGGCTGGAGCCTTGCCAGGAGCAAACCCGGGCCACTGACCCTCCTGAATCTACCAGACAAGATGCTCCTCCCTGGGGCTCCGGTGTGGAGCTCACACACCTGGGGAGCCCCTCTGCCCAGAGGGAGCACAGGCAGAACACAGCATCACCAGGGTCACCAGTGAACAGCCATCTACCGGGGAGCCCAAAGCAGAACCGGAGCACGTCCACACAGGTAGTGTTCTGGGCAGGCATCCTGCAGGCCCAGATGTGTGTCCTAGACCTGGAGGAGGAGCTGGAGAAGACGGAAGGGCTCAAGGCTGGGCTGAAATGCTGTCTCCCCACGCCCCCTGTGGACCTCCCCGGGGACACGGGCCTGCACTCCAGCCCACCTGAGAATGAAGACTCAGGGGAAGACAGCAGTGAGCCTGAGGGAGAGGGCCAGGCATGGCTGAGAGAGGGAACCCCAGACTCTTCCCCACAGTGGGGAGCTGAGGAGGAGAGCATGTTCTTCAGCAACCCCCTCTTCCTGGCGAGTCCTTGCTCAGAGAACAGTGCTTCTGGAGAGTGCTTTTCCTGGGGGGCTTCAGACTCCCATGCAGGTGTGAGGACTGGACCTGAGAGCCCAGCGACTCTGGAGCCTCCCCTCCCAGAAGACACAGTGCTGTGGGAGCTGGAAAGTGAGCCAGATTTGGGGGACGGCGCTGCTATCAGTGGGCATTGTACCCCTCCATTCCCTGTGCCCATCTATAAACCACACTCCATCTGCTGGGCCTCAGTGGCTGCCGCTGAGGGGGCTCCTGCAGCACCTCCTGGTCACGGGGAGAGTGAGGGAGATAGGCTTGGTCCTGCTCCATCTGCAGCACCGTGTGTGGACGAAGCATTGACCTGGGAATCAGGATGTGTCGGATCTGATCTTGGCCCTGCTGCACATCCTGTGCAACCTTGGGCCTCTCTCAGCCCTGAGGGCTGGCAGAGAGGAGGTCCTTTTTGGCCCCAGGTGACTCTTAACTCCCAGGACAGAGATGAGAGGGAGGGTGGACACCCCCAGGAATCTCTTCCCTGCACCTTGGCCCCCTGCCCCTGGAGGAGCCCAGCTTCTTCTCCAGAGCCTAGCAGCCCAGAATCTGAGAGCAGAGGCCCTGGTCCCAGGCCCAGCCCTGCATCGTCCCAGGAGGGCAGCCCGCAGCTTCAACACCACAGCTCAGGCATTTTGCCCAAGTGGACACTAGATGCTTCACAGTCTTCACTCTTGGAGACGGATGGGGAACAGCCAAGTTCCTTGAAGAAAAAGGAGGCAGGGGAGGCCCCAAAACCAGGCGAGGAAGTAAAGAGTGAAGGAACAGCCAGGCCTGCAGAGACTGGAGACGTCCAGCCTGACATTCACCTGACTTCTGCAGAACATGAGAATCTGAGGACACCGATGAACTCTTCTTGGCTTCCTGGGAGCCCTATGCCCCAAGCACAGTCCCCAGAGGAAGGCCAGAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGTCAGGAACAACAAGGTAGCCTGGAACTTGGCCTCACGCCTCTATCGCCTGGAGGGCTTCCGGAAGTCTGAAGTGGCTGCCTACCTGCAGAAGAACAATGACTTTAGCAGGGCTGTGGCTGAGGAGTACCTGTCCTTCTTCCAGTTTGGAGGCCAGAGTCTGGACCGAGCCCTCCGGAGCTTCCTCCAGGCCTTGGTGCTCAGTGGGGAGACTCAGGAACGGGAGCGAATCCTCTACCAGTTCTCCAGACGCTTCCACCATTGCAATCCGGGGATCTTCCCCTCAGTAGATTCTGTACACACCTTGACATGTGCAATCATGCTGCTTAACACGGACCTGCATGGACAGAACATTGGGAAGAGCATGAGCTGCCAGGAATTCATAACCAACCTGAATGGGCTGAGGGATGGCGGGAACTTCCCCAAGGAGCTGCTGAAGGCCCTCTACTGGTCTATCCGCAGCGAGAAGCTCGAGTGGGCCGTGGATGAAGAAGACACAGCCAGACCTGAGAAGGCCCAGCCGTCCCTGCCAGCTGGCAAGATGAGCAAGCCCTTCCTTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCATCCTGGCTCGGAAAATGCATCAAGATGCAGACGGCAAGAAGACGCCATGGGGCAAGCGTGGCTGGAAGATGTTCCACACCTTACTGCGAGGGATGGTTCTCTACTTCCTGAAGCAGGGAGAAGACCACTGTCTGGAGGGGGAGAGCTTGGTGGGGCAGATGGTGGATGAGCCCGTGGGGGTGCACCACTCGCTGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCACGGCTGACTGGCGCCTCTACCTCTTCCAGGCACCCACTGCCAAGGAGATGAGCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCACGCACTCCGCGCCGCCCTTCCCCGCCGCTGTGGGCTCCCAGCGCAGATTCGTGCGGCCCATCCTGCCCGTGGGCCCCGCCCAGAGCTCCCTGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACGCTGCCGCGGACGACCTGCTGGATCTACAGAGGAACCTGCCGGAGCGGCGGGGCCGTGGCCGCGAGCTGGAGGAGCACCGCCTGCGGAAGGAGTACCTGGAGTACGAGAAAACCCGCTACGAGACCTACGTGCAGCTGCTGGTGGCCCGCCTGCACTGCCCCTCTGATGCTCTGGACCTGTGGGAGGAGCAGCTGGGGAGGGAAGCTGGAGGCACTCGGGAGCCCAAGCTCAGCCTGAAGAAGTCCCACTCGAGCCCGTCCCTGCACCAGGATGAGGCTCCCACCACGGCCAAGGTGAAGCGCAACATCTCAGAGCGCAGAACCTACCGGAAGATCATCCCTAAGCGGAACCGCAATCAGCTGTGA
Amino sequence
MMGDYRLPDHPQPMEILNLYLGDSLEPHPGECPRETCSHEDPPEPFEEQTWATDPPEPTRQNVPPWGSGVELTHLGSWVHQDGLEPCQEQTRATDPPESTRQDAPPWGSGVELTHLGSPSAQREHRQNTASPGSPVNSHLPGSPKQNRSTSTQVVFWAGILQAQMCVLDLEEELEKTEGLKAGLKCCLPTPPVDLPGDTGLHSSPPENEDSGEDSSEPEGEGQAWLREGTPDSSPQWGAEEESMFFSNPLFLASPCSENSASGECFSWGASDSHAGVRTGPESPATLEPPLPEDTVLWELESEPDLGDGAAISGHCTPPFPVPIYKPHSICWASVAAAEGAPAAPPGHGESEGDRLGPAPSAAPCVDEALTWESGCVGSDLGPAAHPVQPWASLSPEGWQRGGPFWPQVTLNSQDRDEREGGHPQESLPCTLAPCPWRSPASSPEPSSPESESRGPGPRPSPASSQEGSPQLQHHSSGILPKWTLDASQSSLLETDGEQPSSLKKKEAGEAPKPGEEVKSEGTARPAETGDVQPDIHLTSAEHENLRTPMNSSWLPGSPMPQAQSPEEGQRPPAGDKLANGVRNNKVAWNLASRLYRLEGFRKSEVAAYLQKNNDFSRAVAEEYLSFFQFGGQSLDRALRSFLQALVLSGETQERERILYQFSRRFHHCNPGIFPSVDSVHTLTCAIMLLNTDLHGQNIGKSMSCQEFITNLNGLRDGGNFPKELLKALYWSIRSEKLEWAVDEEDTARPEKAQPSLPAGKMSKPFLQLAQDPTVPTYKQGILARKMHQDADGKKTPWGKRGWKMFHTLLRGMVLYFLKQGEDHCLEGESLVGQMVDEPVGVHHSLATPATHYTKKPHVFQLRTADWRLYLFQAPTAKEMSSWIARINLAAATHSAPPFPAAVGSQRRFVRPILPVGPAQSSLEEQHRSHENCLDAAADDLLDLQRNLPERRGRGRELEEHRLRKEYLEYEKTRYETYVQLLVARLHCPSDALDLWEEQLGREAGGTREPKLSLKKSHSSPSLHQDEAPTTAKVKRNISERRTYRKIIPKRNRNQL*