ENST00000245796.11 PSD4

Information
Transcript ID
ENST00000245796.11
Genome
hg19
Position
chr2:113,931,548-113,966,968
Strand
+
CDS length
3,171
Amino acid length
1,057
Gene symbol
PSD4
Gene type
protein-coding
Gene description
pleckstrin and Sec7 domain containing 4
Gene Entrez Gene ID
23550
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 113,931,548 113,931,631
2 113,939,923 113,941,089
3 113,942,534 113,942,650
4 113,942,942 113,943,017
5 113,943,454 113,943,832
6 113,949,957 113,950,166
7 113,950,625 113,950,705
8 113,950,835 113,950,947
9 113,951,169 113,951,227
10 113,951,436 113,951,525
11 113,953,304 113,953,347
12 113,953,724 113,953,884
13 113,955,141 113,955,211
14 113,955,324 113,955,490
15 113,956,317 113,956,461
16 113,956,660 113,956,803
17 113,958,735 113,966,968
CDS
Exon number Type Start Stop
2 CDS 113,940,034 113,941,089
3 CDS 113,942,534 113,942,650
4 CDS 113,942,942 113,943,017
5 CDS 113,943,454 113,943,832
6 CDS 113,949,957 113,950,166
7 CDS 113,950,625 113,950,705
8 CDS 113,950,835 113,950,947
9 CDS 113,951,169 113,951,227
10 CDS 113,951,436 113,951,525
11 CDS 113,953,304 113,953,347
12 CDS 113,953,724 113,953,884
13 CDS 113,955,141 113,955,211
14 CDS 113,955,324 113,955,490
15 CDS 113,956,317 113,956,461
16 CDS 113,956,660 113,956,803
17 CDS 113,958,735 113,958,992
Other genome
Genome Chromosome Start End Links
hg38 chr2 113,173,971 113,209,391 Link
CDS sequence
ATGATGGGTGACTACAGACTCCCTGACCACCCCCAGCCCATGGAAATTCTCAACCTGTACTTGGGAGACAGCCTGGAGCCCCACCCAGGAGAGTGCCCAAGGGAAACGTGCAGCCATGAGGATCCACCGGAGCCTTTCGAGGAGCAAACCTGGGCCACTGACCCTCCTGAACCTACCAGACAAAATGTTCCTCCCTGGGGCTCCGGTGTGGAGCTCACACACCTGGGGAGCTGGGTCCATCAGGACGGGCTGGAGCCTTGCCAGGAGCAAACCCGGGCCACTGACCCTCCTGAATCTACCAGACAAGATGCTCCTCCCTGGGGCTCCGGTGTGGAGCTCACACACCTGGGGAGCCCCTCTGCCCAGAGGGAGCACAGGCAGAACACAGCATCACCAGGGTCACCAGTGAACAGCCATCTACCGGGGAGCCCAAAGCAGAACCGGAGCACGTCCACACAGGTAGTGTTCTGGGCAGGCATCCTGCAGGCCCAGATGTGTGTCCTAGACCTGGAGGAGGAGCTGGAGAAGACGGAAGGGCTCAAGGCTGGGCTGAAATGCTGTCTCCCCACGCCCCCTGTGGACCTCCCCGGGGACACGGGCCTGCACTCCAGCCCACCTGAGAATGAAGACTCAGGGGAAGACAGCAGTGAGCCTGAGGGAGAGGGCCAGGCATGGCTGAGAGAGGGAACCCCAGACTCTTCCCCACAGTGGGGAGCTGAGGAGGAGAGCATGTTCTTCAGCAACCCCCTCTTCCTGGCGAGTCCTTGCTCAGAGAACAGTGCTTCTGGAGAGTGCTTTTCCTGGGGGGCTTCAGACTCCCATGCAGGTGTGAGGACTGGACCTGAGAGCCCAGCGACTCTGGAGCCTCCCCTCCCAGAAGACACAGTGCTGTGGGAGCTGGAAAGTGAGCCAGATTTGGGGGACGGCGCTGCTATCAGTGGGCATTGTACCCCTCCATTCCCTGTGCCCATCTATAAACCACACTCCATCTGCTGGGCCTCAGTGGCTGCCGCTGAGGGGGCTCCTGCAGCACCTCCTGGTCACGGGGAGAGTGAGGGAGATAGGCTTGGTCCTGCTCCATCTGCAGCACCGTGTGTGGACGAAGCATTGACCTGGGAATCAGGATGTGTCGGATCTGATCTTGGCCCTGCTGCACATCCTGTGCAACCTTGGGCCTCTCTCAGCCCTGAGGGCTGGCAGAGAGGAGGTCCTTTTTGGCCCCAGGTGACTCTTAACTCCCAGGACAGAGATGAGAGGGAGGGTGGACACCCCCAGGAATCTCTTCCCTGCACCTTGGCCCCCTGCCCCTGGAGGAGCCCAGCTTCTTCTCCAGAGCCTAGCAGCCCAGAATCTGAGAGCAGAGGCCCTGGTCCCAGGCCCAGCCCTGCATCGTCCCAGGAGGGCAGCCCGCAGCTTCAACACCACAGCTCAGGCATTTTGCCCAAGTGGACACTAGATGCTTCACAGTCTTCACTCTTGGAGACGGATGGGGAACAGCCAAGTTCCTTGAAGAAAAAGGAGGCAGGGGAGGCCCCAAAACCAGGCGAGGAAGTAAAGAGTGAAGGAACAGCCAGGCCTGCAGAGACTGGAGACGTCCAGCCTGACATTCACCTGACTTCTGCAGAACATGAGAATCTGAGGACACCGATGAACTCTTCTTGGCTTCCTGGGAGCCCTATGCCCCAAGCACAGTCCCCAGAGGAAGGCCAGAGACCACCAGCTGGAGACAAGCTAGCTAATGGCGTCAGGAACAACAAGGTAGCCTGGAACTTGGCCTCACGCCTCTATCGCCTGGAGGGCTTCCGGAAGTCTGAAGTGGCTGCCTACCTGCAGAAGAACAATGACTTTAGCAGGGCTGTGGCTGAGGAGTACCTGTCCTTCTTCCAGTTTGGAGGCCAGAGTCTGGACCGAGCCCTCCGGAGCTTCCTCCAGGCCTTGGTGCTCAGTGGGGAGACTCAGGAACGGGAGCGAATCCTCTACCAGTTCTCCAGACGCTTCCACCATTGCAATCCGGGGATCTTCCCCTCAGTAGATTCTGTACACACCTTGACATGTGCAATCATGCTGCTTAACACGGACCTGCATGGACAGAACATTGGGAAGAGCATGAGCTGCCAGGAATTCATAACCAACCTGAATGGGCTGAGGGATGGCGGGAACTTCCCCAAGGAGCTGCTGAAGGCCCTCTACTGGTCTATCCGCAGCGAGAAGCTCGAGTGGGCCGTGGATGAAGAAGACACAGCCAGACCTGAGAAGGCCCAGCCGTCCCTGCCAGCTGGCAAGATGAGCAAGCCCTTCCTTCAGCTGGCTCAGGATCCCACAGTGCCCACCTACAAGCAGGGCATCCTGGCTCGGAAAATGCATCAAGATGCAGACGGCAAGAAGACGCCATGGGGCAAGCGTGGCTGGAAGATGTTCCACACCTTACTGCGAGGGATGGTTCTCTACTTCCTGAAGCAGGGAGAAGACCACTGTCTGGAGGGGGAGAGCTTGGTGGGGCAGATGGTGGATGAGCCCGTGGGGGTGCACCACTCGCTGGCCACCCCCGCCACGCATTACACCAAGAAGCCGCACGTCTTCCAGCTGCGCACGGCTGACTGGCGCCTCTACCTCTTCCAGGCACCCACTGCCAAGGAGATGAGCTCCTGGATCGCGCGCATCAACTTGGCTGCGGCCACGCACTCCGCGCCGCCCTTCCCCGCCGCTGTGGGCTCCCAGCGCAGATTCGTGCGGCCCATCCTGCCCGTGGGCCCCGCCCAGAGCTCCCTGGAGGAGCAGCATCGATCCCACGAGAACTGCCTGGACGCTGCCGCGGACGACCTGCTGGATCTACAGAGGAACCTGCCGGAGCGGCGGGGCCGTGGCCGCGAGCTGGAGGAGCACCGCCTGCGGAAGGAGTACCTGGAGTACGAGAAAACCCGCTACGAGACCTACGTGCAGCTGCTGGTGGCCCGCCTGCACTGCCCCTCTGATGCTCTGGACCTGTGGGAGGAGCAGCTGGGGAGGGAAGCTGGAGGCACTCGGGAGCCCAAGCTCAGCCTGAAGAAGTCCCACTCGAGCCCGTCCCTGCACCAGGATGAGGCTCCCACCACGGCCAAGGTGAAGCGCAACATCTCAGAGCGCAGAACCTACCGGAAGATCATCCCTAAGCGGAACCGCAATCAGCTGTGA
Amino sequence
MMGDYRLPDHPQPMEILNLYLGDSLEPHPGECPRETCSHEDPPEPFEEQTWATDPPEPTRQNVPPWGSGVELTHLGSWVHQDGLEPCQEQTRATDPPESTRQDAPPWGSGVELTHLGSPSAQREHRQNTASPGSPVNSHLPGSPKQNRSTSTQVVFWAGILQAQMCVLDLEEELEKTEGLKAGLKCCLPTPPVDLPGDTGLHSSPPENEDSGEDSSEPEGEGQAWLREGTPDSSPQWGAEEESMFFSNPLFLASPCSENSASGECFSWGASDSHAGVRTGPESPATLEPPLPEDTVLWELESEPDLGDGAAISGHCTPPFPVPIYKPHSICWASVAAAEGAPAAPPGHGESEGDRLGPAPSAAPCVDEALTWESGCVGSDLGPAAHPVQPWASLSPEGWQRGGPFWPQVTLNSQDRDEREGGHPQESLPCTLAPCPWRSPASSPEPSSPESESRGPGPRPSPASSQEGSPQLQHHSSGILPKWTLDASQSSLLETDGEQPSSLKKKEAGEAPKPGEEVKSEGTARPAETGDVQPDIHLTSAEHENLRTPMNSSWLPGSPMPQAQSPEEGQRPPAGDKLANGVRNNKVAWNLASRLYRLEGFRKSEVAAYLQKNNDFSRAVAEEYLSFFQFGGQSLDRALRSFLQALVLSGETQERERILYQFSRRFHHCNPGIFPSVDSVHTLTCAIMLLNTDLHGQNIGKSMSCQEFITNLNGLRDGGNFPKELLKALYWSIRSEKLEWAVDEEDTARPEKAQPSLPAGKMSKPFLQLAQDPTVPTYKQGILARKMHQDADGKKTPWGKRGWKMFHTLLRGMVLYFLKQGEDHCLEGESLVGQMVDEPVGVHHSLATPATHYTKKPHVFQLRTADWRLYLFQAPTAKEMSSWIARINLAAATHSAPPFPAAVGSQRRFVRPILPVGPAQSSLEEQHRSHENCLDAAADDLLDLQRNLPERRGRGRELEEHRLRKEYLEYEKTRYETYVQLLVARLHCPSDALDLWEEQLGREAGGTREPKLSLKKSHSSPSLHQDEAPTTAKVKRNISERRTYRKIIPKRNRNQL*