ENST00000556614.6 HOPX

Information
Transcript ID
ENST00000556614.6
Genome
hg38
Position
chr4:56,647,998-56,656,525
Strand
-
CDS length
222
Amino acid length
74
Gene symbol
HOPX
Gene type
protein-coding
Gene description
HOP homeobox
Gene Entrez Gene ID
84525
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 56,647,998 56,648,797
2 56,655,857 56,656,012
1 56,656,344 56,656,525
CDS
Exon number Type Start Stop
3 CDS 56,648,720 56,648,797
2 CDS 56,655,857 56,656,000
Other genome
Genome Chromosome Start End Links
hg19 chr4 57,514,164 57,522,691 Link
CDS sequence
ATGTCGGCGGAGACCGCGAGCGGCCCCACAGAGGACCAGGTGGAAATCCTGGAGTACAACTTCAACAAGGTCGACAAGCACCCGGATTCCACCACGCTGTGCCTCATCGCGGCCGAGGCAGGCCTTTCCGAGGAGGAGACCCAGAAATGGTTTAAGCAGCGCCTGGCAAAGTGGCGGCGCTCAGAAGGCCTGCCCTCAGAGTGCAGATCCGTCACAGACTAA
Amino sequence
MSAETASGPTEDQVEILEYNFNKVDKHPDSTTLCLIAAEAGLSEEETQKWFKQRLAKWRRSEGLPSECRSVTD*