ENST00000308284.11 SEC16B
Information
- Transcript ID
- ENST00000308284.11
- Genome
- hg19
- Position
- chr1:177,897,923-177,939,193
- Strand
- -
- CDS length
- 3,183
- Amino acid length
- 1,061
- Gene symbol
- SEC16B
- Gene type
- protein-coding
- Gene description
- SEC16 homolog B, endoplasmic reticulum export factor
- Gene Entrez Gene ID
- 89866
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 26 | 177,897,923 | 177,899,064 |
| 25 | 177,899,680 | 177,899,778 |
| 24 | 177,901,625 | 177,901,704 |
| 23 | 177,901,833 | 177,901,941 |
| 22 | 177,902,349 | 177,902,447 |
| 21 | 177,902,619 | 177,902,771 |
| 20 | 177,905,433 | 177,905,500 |
| 19 | 177,906,349 | 177,906,648 |
| 18 | 177,908,837 | 177,908,912 |
| 17 | 177,909,745 | 177,909,849 |
| 16 | 177,911,035 | 177,911,175 |
| 15 | 177,913,696 | 177,913,801 |
| 14 | 177,915,555 | 177,915,666 |
| 13 | 177,916,960 | 177,917,077 |
| 12 | 177,921,049 | 177,921,130 |
| 11 | 177,923,414 | 177,923,511 |
| 10 | 177,927,267 | 177,927,497 |
| 9 | 177,927,975 | 177,928,110 |
| 8 | 177,929,477 | 177,929,538 |
| 7 | 177,929,926 | 177,930,074 |
| 6 | 177,930,725 | 177,930,869 |
| 5 | 177,933,306 | 177,933,414 |
| 4 | 177,934,182 | 177,934,302 |
| 3 | 177,935,028 | 177,935,140 |
| 2 | 177,936,818 | 177,937,174 |
| 1 | 177,939,019 | 177,939,193 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 26 | CDS | 177,898,993 | 177,899,064 |
| 25 | CDS | 177,899,680 | 177,899,778 |
| 24 | CDS | 177,901,625 | 177,901,704 |
| 23 | CDS | 177,901,833 | 177,901,941 |
| 22 | CDS | 177,902,349 | 177,902,447 |
| 21 | CDS | 177,902,619 | 177,902,771 |
| 20 | CDS | 177,905,433 | 177,905,500 |
| 19 | CDS | 177,906,349 | 177,906,648 |
| 18 | CDS | 177,908,837 | 177,908,912 |
| 17 | CDS | 177,909,745 | 177,909,849 |
| 16 | CDS | 177,911,035 | 177,911,175 |
| 15 | CDS | 177,913,696 | 177,913,801 |
| 14 | CDS | 177,915,555 | 177,915,666 |
| 13 | CDS | 177,916,960 | 177,917,077 |
| 12 | CDS | 177,921,049 | 177,921,130 |
| 11 | CDS | 177,923,414 | 177,923,511 |
| 10 | CDS | 177,927,267 | 177,927,497 |
| 9 | CDS | 177,927,975 | 177,928,110 |
| 8 | CDS | 177,929,477 | 177,929,538 |
| 7 | CDS | 177,929,926 | 177,930,074 |
| 6 | CDS | 177,930,725 | 177,930,869 |
| 5 | CDS | 177,933,306 | 177,933,414 |
| 4 | CDS | 177,934,182 | 177,934,302 |
| 3 | CDS | 177,935,028 | 177,935,140 |
| 2 | CDS | 177,936,818 | 177,937,116 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr1 | 177,928,788 | 177,970,058 | Link |
CDS sequence
ATGGAACTTTGGGCTCCCCAGAGGCTGCCCCAGACACGAGGGAAGGCCACAGCACCCTCAAAGGATCCAGACCGAGGGTTTCGGAGAGATGGACATCATCGGCCTGTCCCTCACTCTTGGCACAATGGAGAGAGGTTTCACCAATGGCAAGACAACCGTGGGAGCCCCCAGCCACAGCAGGAGCCCAGGGCAGACCATCAGCAGCAGCCCCATTATGCATCCAGGCCAGGGGACTGGCATCAGCCTGTGTCTGGAGTTGACTATTACGAAGGTGGTTATCGCAATCAGTTGTATTCAAGGCCAGGTTATGAGAATTCATATCAGAGCTATCAGTCTCCCACAATGAGGGAGGAATATGCTTATGGAAGTTATTACTATCATGGACACCCACAGTGGCTGCAGGAAGAAAGAGTGCCAAGGCAACGGAGTCCTTATATCTGGCACGAAGATTACCGAGAGCAAAAGTACCTTGATGAACATCATTATGAAAACCAGCACAGTCCATTTGGAACAAATAGTGAGACCCACTTCCAATCTAACAGTAGGAACCCTTGTAAAGACAGCCCTGCTTCCAACTCTGGACAGGAGTGGCCGGGGGAGCTGTTTCCAGGGAGCCTGCTTGCTGAGGCCCAGAAAAATAAGCCATCATTGGCTAGTGAGTCCAACCTTCTCCAGCAGCGTGAGTCTGGTCTCAGCTCCAGCAGCTATGAGCTCAGTCAGTACATCAGAGATGCCCCGGAGCGGGATGATCCCCCAGCTTCAGCAGCTTGGAGTCCAGTTCAGGCTGATGTCTCCTCAGCTGGTCCCAAAGCACCCATGAAGTTCTACATCCCTCATGTTCCTGTGAGTTTCGGGCCAGGAGGTCAGCTGGTGCATGTAGGTCCCAGCTCTCCCACTGACGGGCAAGCAGCCCTTGTTGAACTGCACAGCATGGAGGTTATTCTTAATGATTCCGAAGAGCAAGAGGAGATGAGAAGTTTCTCAGGACCCTTGATTAGGGAAGATGTACATAAGGTGGATATTATGACGTTTTGCCAGCAGAAAGCAGCTCAGAGCTGCAAATCTGAGACACTGGGGAGCAGAGACTCAGCTCTACTGTGGCAGCTCTTGGTTCTCCTTTGTCGCCAGAATGGGTCCATGGTGGGGTCTGACATCGCTGAGCTGCTAATGCAAGACTGCAAGAAGCTGGAGAAGTACAAGCGGCAGCCCCCTGTGGCCAACCTCATCAACCTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGGGACCCCGAACCTGCTCACGGGAGAGATCCCCCCCAGTGTGGAGACACCTGCGCAGATCGTGGAGAAATTCACTAGGCTGCTCTACTATGGAAGGAAGAAGGAAGCCTTGGAGTGGGCCATGAAGAACCACTTGTGGGGCCATGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATGAGTGGCTTCACCAGCACGCTGGCGCTCAATGACCCACTGCAGACCCTCTTCCAGCTCATGTCGGGGAGGATTCCACAGGCAGCCACGTGTTGTGGAGAAAAGCAGTGGGGAGACTGGAGGCCTCACTTGGCTGTGATTCTGTCGAATCAGGCTGGGGACCCAGAGCTGTATCAGCGTGCGATTGTTGCCATTGGGGACACCCTGGCTGGGAAGGGGCTTGTGGAGGCAGCTCACTTCTGCTATCTCATGGCTCACGTGCCCTTTGGCCACTACACCGTGAAGACAGACCATCTGGTCTTGCTGGGCAGCAGCCACAGTCAAGAGTTTTTGAAATTTGCAACAACTGAGGCAATCCAGAGGACGGAAATCTTCGAGTACTGTCAGATGCTGGGCCGCCCCAAATCCTTCATCCCTTCTTTCCAGGTGTATAAGCTCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTGTCCCAGGCTTTGCATTACTGCGAAGCCATTGGTGCAGCTGTCTTGAGCCAGGGAGAGAGCAGTCACCCTGTGCTATTAGTGGAACTCATCAAGCTAGCAGAGAAACTGAAGCTGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACCTGGAGCCAGATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAGACATTGGGGATCCTCATCCTACTCGCTCAGATATTTCGGGAGCCGGAGGAACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCTGAAGCCCCTGGGTACCGCTCAGCTCTGTGGCTGACACCTGAGCAGACCTGCCTGCTCCAGCCCAGCCCACAGCAGCCCTTTCCCCTCCAGCCGGGCTCCTACCCAGCAGGAGGGGGTGCAGGGCAGACAGGGACACCGAGGCCTTTTTACTCAGTTCCTGAGACCCATCTACCAGGGACTGGCAGCAGCGTGGCAGTGACAGAGGCCACTGGAGGAACAGTCTGGGAGGAAATGCTGCAGACACACCTGGGCCCTGGAGAGAACACAGTGTCTCAAGAAACTTCCCAGCCTCCTGATGGCCAAGAGGTCATTTCCAAACCACAGACACCATTGGCTGCTAGACCACGAAGTATTTCTGAGAGTTCCGCCAGTTCAGCCAAGGAGGATGAGAAGGAGTCCTCTGATGAGGCTGATAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGATGGGAAGGAGCATACAAAGAGCTCAGGGTTTGGCTGGTTCAGCTGGTTTCGATCGAAGCCCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGACTCTGAGGAGACCCCCAGAGCATCTTCTCCCCACCAGGCTGGCCTGGGCCTCTCACTGACACCTTCCCCTGAGTCCCCACCTCTGCCGGATGTTAGTGCCTTCTCCAGGGGCAGAGGTGGGGGTGAAGGCCGAGGATCCGCATCCAGCGGGGGAGCAGCTGCGGGCGCTGGGGTTGGAGGCTTGTCTGGACCAGAGAGTGTTTCCTTTGAGCTCTGCTCCAACCCTGGTGTTCTTCTTCCTCCACCTGCCTTAAAAGGGGCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAGCTGCCCACGGCCACTAGCCTGAATCGGCCAAATCGCCTAGCTCAGCGTCGCTATCCCACCCAGCCATGCTGA
Amino sequence
MELWAPQRLPQTRGKATAPSKDPDRGFRRDGHHRPVPHSWHNGERFHQWQDNRGSPQPQQEPRADHQQQPHYASRPGDWHQPVSGVDYYEGGYRNQLYSRPGYENSYQSYQSPTMREEYAYGSYYYHGHPQWLQEERVPRQRSPYIWHEDYREQKYLDEHHYENQHSPFGTNSETHFQSNSRNPCKDSPASNSGQEWPGELFPGSLLAEAQKNKPSLASESNLLQQRESGLSSSSYELSQYIRDAPERDDPPASAAWSPVQADVSSAGPKAPMKFYIPHVPVSFGPGGQLVHVGPSSPTDGQAALVELHSMEVILNDSEEQEEMRSFSGPLIREDVHKVDIMTFCQQKAAQSCKSETLGSRDSALLWQLLVLLCRQNGSMVGSDIAELLMQDCKKLEKYKRQPPVANLINLTDEDWPVLSSGTPNLLTGEIPPSVETPAQIVEKFTRLLYYGRKKEALEWAMKNHLWGHALFLSSKMDPQTYSWVMSGFTSTLALNDPLQTLFQLMSGRIPQAATCCGEKQWGDWRPHLAVILSNQAGDPELYQRAIVAIGDTLAGKGLVEAAHFCYLMAHVPFGHYTVKTDHLVLLGSSHSQEFLKFATTEAIQRTEIFEYCQMLGRPKSFIPSFQVYKLLYASRLADYGLVSQALHYCEAIGAAVLSQGESSHPVLLVELIKLAEKLKLSDPLVLERRSGDRDLEPDWLAQLRRQLEQKVAGDIGDPHPTRSDISGAGGTTTENTFYQDFSGCQGYSEAPGYRSALWLTPEQTCLLQPSPQQPFPLQPGSYPAGGGAGQTGTPRPFYSVPETHLPGTGSSVAVTEATGGTVWEEMLQTHLGPGENTVSQETSQPPDGQEVISKPQTPLAARPRSISESSASSAKEDEKESSDEADKNSPRNTAQRGKLGDGKEHTKSSGFGWFSWFRSKPTKNASPAGDEDSSDSPDSEETPRASSPHQAGLGLSLTPSPESPPLPDVSAFSRGRGGGEGRGSASSGGAAAGAGVGGLSGPESVSFELCSNPGVLLPPPALKGAVPLYNPSQVPQLPTATSLNRPNRLAQRRYPTQPC*