ENST00000308284.11 SEC16B
Information
- Transcript ID
- ENST00000308284.11
- Genome
- hg38
- Position
- chr1:177,928,788-177,970,058
- Strand
- -
- CDS length
- 3,183
- Amino acid length
- 1,061
- Gene symbol
- SEC16B
- Gene type
- protein-coding
- Gene description
- SEC16 homolog B, endoplasmic reticulum export factor
- Gene Entrez Gene ID
- 89866
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 26 | 177,928,788 | 177,929,929 |
| 25 | 177,930,545 | 177,930,643 |
| 24 | 177,932,490 | 177,932,569 |
| 23 | 177,932,698 | 177,932,806 |
| 22 | 177,933,214 | 177,933,312 |
| 21 | 177,933,484 | 177,933,636 |
| 20 | 177,936,298 | 177,936,365 |
| 19 | 177,937,214 | 177,937,513 |
| 18 | 177,939,702 | 177,939,777 |
| 17 | 177,940,610 | 177,940,714 |
| 16 | 177,941,900 | 177,942,040 |
| 15 | 177,944,561 | 177,944,666 |
| 14 | 177,946,420 | 177,946,531 |
| 13 | 177,947,825 | 177,947,942 |
| 12 | 177,951,914 | 177,951,995 |
| 11 | 177,954,279 | 177,954,376 |
| 10 | 177,958,132 | 177,958,362 |
| 9 | 177,958,840 | 177,958,975 |
| 8 | 177,960,342 | 177,960,403 |
| 7 | 177,960,791 | 177,960,939 |
| 6 | 177,961,590 | 177,961,734 |
| 5 | 177,964,171 | 177,964,279 |
| 4 | 177,965,047 | 177,965,167 |
| 3 | 177,965,893 | 177,966,005 |
| 2 | 177,967,683 | 177,968,039 |
| 1 | 177,969,884 | 177,970,058 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 26 | CDS | 177,929,858 | 177,929,929 |
| 25 | CDS | 177,930,545 | 177,930,643 |
| 24 | CDS | 177,932,490 | 177,932,569 |
| 23 | CDS | 177,932,698 | 177,932,806 |
| 22 | CDS | 177,933,214 | 177,933,312 |
| 21 | CDS | 177,933,484 | 177,933,636 |
| 20 | CDS | 177,936,298 | 177,936,365 |
| 19 | CDS | 177,937,214 | 177,937,513 |
| 18 | CDS | 177,939,702 | 177,939,777 |
| 17 | CDS | 177,940,610 | 177,940,714 |
| 16 | CDS | 177,941,900 | 177,942,040 |
| 15 | CDS | 177,944,561 | 177,944,666 |
| 14 | CDS | 177,946,420 | 177,946,531 |
| 13 | CDS | 177,947,825 | 177,947,942 |
| 12 | CDS | 177,951,914 | 177,951,995 |
| 11 | CDS | 177,954,279 | 177,954,376 |
| 10 | CDS | 177,958,132 | 177,958,362 |
| 9 | CDS | 177,958,840 | 177,958,975 |
| 8 | CDS | 177,960,342 | 177,960,403 |
| 7 | CDS | 177,960,791 | 177,960,939 |
| 6 | CDS | 177,961,590 | 177,961,734 |
| 5 | CDS | 177,964,171 | 177,964,279 |
| 4 | CDS | 177,965,047 | 177,965,167 |
| 3 | CDS | 177,965,893 | 177,966,005 |
| 2 | CDS | 177,967,683 | 177,967,981 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr1 | 177,897,923 | 177,939,193 | Link |
CDS sequence
ATGGAACTTTGGGCTCCCCAGAGGCTGCCCCAGACACGAGGGAAGGCCACAGCACCCTCAAAGGATCCAGACCGAGGGTTTCGGAGAGATGGACATCATCGGCCTGTCCCTCACTCTTGGCACAATGGAGAGAGGTTTCACCAATGGCAAGACAACCGTGGGAGCCCCCAGCCACAGCAGGAGCCCAGGGCAGACCATCAGCAGCAGCCCCATTATGCATCCAGGCCAGGGGACTGGCATCAGCCTGTGTCTGGAGTTGACTATTACGAAGGTGGTTATCGCAATCAGTTGTATTCAAGGCCAGGTTATGAGAATTCATATCAGAGCTATCAGTCTCCCACAATGAGGGAGGAATATGCTTATGGAAGTTATTACTATCATGGACACCCACAGTGGCTGCAGGAAGAAAGAGTGCCAAGGCAACGGAGTCCTTATATCTGGCACGAAGATTACCGAGAGCAAAAGTACCTTGATGAACATCATTATGAAAACCAGCACAGTCCATTTGGAACAAATAGTGAGACCCACTTCCAATCTAACAGTAGGAACCCTTGTAAAGACAGCCCTGCTTCCAACTCTGGACAGGAGTGGCCGGGGGAGCTGTTTCCAGGGAGCCTGCTTGCTGAGGCCCAGAAAAATAAGCCATCATTGGCTAGTGAGTCCAACCTTCTCCAGCAGCGTGAGTCTGGTCTCAGCTCCAGCAGCTATGAGCTCAGTCAGTACATCAGAGATGCCCCGGAGCGGGATGATCCCCCAGCTTCAGCAGCTTGGAGTCCAGTTCAGGCTGATGTCTCCTCAGCTGGTCCCAAAGCACCCATGAAGTTCTACATCCCTCATGTTCCTGTGAGTTTCGGGCCAGGAGGTCAGCTGGTGCATGTAGGTCCCAGCTCTCCCACTGACGGGCAAGCAGCCCTTGTTGAACTGCACAGCATGGAGGTTATTCTTAATGATTCCGAAGAGCAAGAGGAGATGAGAAGTTTCTCAGGACCCTTGATTAGGGAAGATGTACATAAGGTGGATATTATGACGTTTTGCCAGCAGAAAGCAGCTCAGAGCTGCAAATCTGAGACACTGGGGAGCAGAGACTCAGCTCTACTGTGGCAGCTCTTGGTTCTCCTTTGTCGCCAGAATGGGTCCATGGTGGGGTCTGACATCGCTGAGCTGCTAATGCAAGACTGCAAGAAGCTGGAGAAGTACAAGCGGCAGCCCCCTGTGGCCAACCTCATCAACCTGACCGATGAGGACTGGCCAGTGCTGAGCTCTGGGACCCCGAACCTGCTCACGGGAGAGATCCCCCCCAGTGTGGAGACACCTGCGCAGATCGTGGAGAAATTCACTAGGCTGCTCTACTATGGAAGGAAGAAGGAAGCCTTGGAGTGGGCCATGAAGAACCACTTGTGGGGCCATGCTTTGTTCCTGTCCAGCAAGATGGACCCACAGACCTACAGCTGGGTCATGAGTGGCTTCACCAGCACGCTGGCGCTCAATGACCCACTGCAGACCCTCTTCCAGCTCATGTCGGGGAGGATTCCACAGGCAGCCACGTGTTGTGGAGAAAAGCAGTGGGGAGACTGGAGGCCTCACTTGGCTGTGATTCTGTCGAATCAGGCTGGGGACCCAGAGCTGTATCAGCGTGCGATTGTTGCCATTGGGGACACCCTGGCTGGGAAGGGGCTTGTGGAGGCAGCTCACTTCTGCTATCTCATGGCTCACGTGCCCTTTGGCCACTACACCGTGAAGACAGACCATCTGGTCTTGCTGGGCAGCAGCCACAGTCAAGAGTTTTTGAAATTTGCAACAACTGAGGCAATCCAGAGGACGGAAATCTTCGAGTACTGTCAGATGCTGGGCCGCCCCAAATCCTTCATCCCTTCTTTCCAGGTGTATAAGCTCCTTTATGCTTCCCGTCTGGCAGATTATGGCCTCGTGTCCCAGGCTTTGCATTACTGCGAAGCCATTGGTGCAGCTGTCTTGAGCCAGGGAGAGAGCAGTCACCCTGTGCTATTAGTGGAACTCATCAAGCTAGCAGAGAAACTGAAGCTGTCAGATCCTCTGGTTTTAGAAAGACGCAGTGGAGACAGGGACCTGGAGCCAGATTGGCTAGCGCAACTTCGGAGGCAGCTGGAGCAAAAGGTAGCAGGAGACATTGGGGATCCTCATCCTACTCGCTCAGATATTTCGGGAGCCGGAGGAACAACAACAGAAAACACTTTCTACCAGGACTTTTCTGGATGTCAAGGCTACTCTGAAGCCCCTGGGTACCGCTCAGCTCTGTGGCTGACACCTGAGCAGACCTGCCTGCTCCAGCCCAGCCCACAGCAGCCCTTTCCCCTCCAGCCGGGCTCCTACCCAGCAGGAGGGGGTGCAGGGCAGACAGGGACACCGAGGCCTTTTTACTCAGTTCCTGAGACCCATCTACCAGGGACTGGCAGCAGCGTGGCAGTGACAGAGGCCACTGGAGGAACAGTCTGGGAGGAAATGCTGCAGACACACCTGGGCCCTGGAGAGAACACAGTGTCTCAAGAAACTTCCCAGCCTCCTGATGGCCAAGAGGTCATTTCCAAACCACAGACACCATTGGCTGCTAGACCACGAAGTATTTCTGAGAGTTCCGCCAGTTCAGCCAAGGAGGATGAGAAGGAGTCCTCTGATGAGGCTGATAAAAACTCTCCCCGAAATACTGCCCAGAGAGGCAAGCTCGGAGATGGGAAGGAGCATACAAAGAGCTCAGGGTTTGGCTGGTTCAGCTGGTTTCGATCGAAGCCCACCAAGAACGCATCCCCCGCTGGAGACGAGGACTCCTCAGACAGCCCTGACTCTGAGGAGACCCCCAGAGCATCTTCTCCCCACCAGGCTGGCCTGGGCCTCTCACTGACACCTTCCCCTGAGTCCCCACCTCTGCCGGATGTTAGTGCCTTCTCCAGGGGCAGAGGTGGGGGTGAAGGCCGAGGATCCGCATCCAGCGGGGGAGCAGCTGCGGGCGCTGGGGTTGGAGGCTTGTCTGGACCAGAGAGTGTTTCCTTTGAGCTCTGCTCCAACCCTGGTGTTCTTCTTCCTCCACCTGCCTTAAAAGGGGCTGTTCCTCTTTACAACCCATCTCAGGTGCCTCAGCTGCCCACGGCCACTAGCCTGAATCGGCCAAATCGCCTAGCTCAGCGTCGCTATCCCACCCAGCCATGCTGA
Amino sequence
MELWAPQRLPQTRGKATAPSKDPDRGFRRDGHHRPVPHSWHNGERFHQWQDNRGSPQPQQEPRADHQQQPHYASRPGDWHQPVSGVDYYEGGYRNQLYSRPGYENSYQSYQSPTMREEYAYGSYYYHGHPQWLQEERVPRQRSPYIWHEDYREQKYLDEHHYENQHSPFGTNSETHFQSNSRNPCKDSPASNSGQEWPGELFPGSLLAEAQKNKPSLASESNLLQQRESGLSSSSYELSQYIRDAPERDDPPASAAWSPVQADVSSAGPKAPMKFYIPHVPVSFGPGGQLVHVGPSSPTDGQAALVELHSMEVILNDSEEQEEMRSFSGPLIREDVHKVDIMTFCQQKAAQSCKSETLGSRDSALLWQLLVLLCRQNGSMVGSDIAELLMQDCKKLEKYKRQPPVANLINLTDEDWPVLSSGTPNLLTGEIPPSVETPAQIVEKFTRLLYYGRKKEALEWAMKNHLWGHALFLSSKMDPQTYSWVMSGFTSTLALNDPLQTLFQLMSGRIPQAATCCGEKQWGDWRPHLAVILSNQAGDPELYQRAIVAIGDTLAGKGLVEAAHFCYLMAHVPFGHYTVKTDHLVLLGSSHSQEFLKFATTEAIQRTEIFEYCQMLGRPKSFIPSFQVYKLLYASRLADYGLVSQALHYCEAIGAAVLSQGESSHPVLLVELIKLAEKLKLSDPLVLERRSGDRDLEPDWLAQLRRQLEQKVAGDIGDPHPTRSDISGAGGTTTENTFYQDFSGCQGYSEAPGYRSALWLTPEQTCLLQPSPQQPFPLQPGSYPAGGGAGQTGTPRPFYSVPETHLPGTGSSVAVTEATGGTVWEEMLQTHLGPGENTVSQETSQPPDGQEVISKPQTPLAARPRSISESSASSAKEDEKESSDEADKNSPRNTAQRGKLGDGKEHTKSSGFGWFSWFRSKPTKNASPAGDEDSSDSPDSEETPRASSPHQAGLGLSLTPSPESPPLPDVSAFSRGRGGGEGRGSASSGGAAAGAGVGGLSGPESVSFELCSNPGVLLPPPALKGAVPLYNPSQVPQLPTATSLNRPNRLAQRRYPTQPC*