ENST00000402541.5 HS1BP3
Information
- Transcript ID
- ENST00000402541.5
- Genome
- hg19
- Position
- chr2:20,834,476-20,850,838
- Strand
- -
- CDS length
- 642
- Amino acid length
- 214
- Gene symbol
- HS1BP3
- Gene type
- protein-coding
- Gene description
- HCLS1 binding protein 3
- Gene Entrez Gene ID
- 64342
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 20,834,476 | 20,838,412 |
| 3 | 20,840,733 | 20,840,940 |
| 2 | 20,845,100 | 20,845,265 |
| 1 | 20,850,792 | 20,850,838 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 20,838,177 | 20,838,412 |
| 3 | CDS | 20,840,733 | 20,840,940 |
| 2 | CDS | 20,845,100 | 20,845,265 |
| 1 | CDS | 20,850,792 | 20,850,823 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr2 | 20,634,716 | 20,651,078 | Link |
CDS sequence
ATGCAGTCCCCGGCGGTGCTCGTCACCTCCAGGCGACTTCAGAATGCCCACACTGGCCTCGACCTGACTGTGCCCCAGCACCAGGAGGTACGGGGCAAGATGATGTCTGGACACGTGGAGTACCAGATCCTGGTGGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGTTCTTGGTCTCCAAAAAGTACAGCGAGATTGAGGAGTTTTACCAGAAACTGAGCAGTCGTTATGCAGCAGCCAGCCTCCCCCCACTACCCAGGAAGGTCCTGTTTGTTGGGGAGTCTGACATCCGGGAGAGGAGAGCCGTGTTCAATGAGATCCTGCGCTGTGTCTCCAAGGATGCCGAGTTGGCAGGCAGCCCAGAGCTGCTAGAGTTCTTAGGTACCAGATCCCCAGGGGCTGCAGGGCTCACCAGCAGAGATTCCTCTGTCCTGGATGGCACAGACAGTCAGACAGGGAATGATGAAGAGGCTTTCGACTTTTTTGAGGAGCAAGACCAAGTGGCAGAAGAGGGTCCGCCCGTCCAGAGCCTGAAGGGCGAGGATGCTGAGGAATCCTTGGAGGAGGAGGAGGCGCTGGACCCTCTGGGCATTATGCGGTTGGTCTCCTGTTGTTGA
Amino sequence
MQSPAVLVTSRRLQNAHTGLDLTVPQHQEVRGKMMSGHVEYQILVVTRLAAFKSAKHRPEDVVQFLVSKKYSEIEEFYQKLSSRYAAASLPPLPRKVLFVGESDIRERRAVFNEILRCVSKDAELAGSPELLEFLGTRSPGAAGLTSRDSSVLDGTDSQTGNDEEAFDFFEEQDQVAEEGPPVQSLKGEDAEESLEEEEALDPLGIMRLVSCC*