ENST00000402541.5 HS1BP3
Information
- Transcript ID
- ENST00000402541.5
- Genome
- hg38
- Position
- chr2:20,634,716-20,651,078
- Strand
- -
- CDS length
- 642
- Amino acid length
- 214
- Gene symbol
- HS1BP3
- Gene type
- protein-coding
- Gene description
- HCLS1 binding protein 3
- Gene Entrez Gene ID
- 64342
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 4 | 20,634,716 | 20,638,652 |
| 3 | 20,640,973 | 20,641,180 |
| 2 | 20,645,340 | 20,645,505 |
| 1 | 20,651,032 | 20,651,078 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 4 | CDS | 20,638,417 | 20,638,652 |
| 3 | CDS | 20,640,973 | 20,641,180 |
| 2 | CDS | 20,645,340 | 20,645,505 |
| 1 | CDS | 20,651,032 | 20,651,063 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr2 | 20,834,476 | 20,850,838 | Link |
CDS sequence
ATGCAGTCCCCGGCGGTGCTCGTCACCTCCAGGCGACTTCAGAATGCCCACACTGGCCTCGACCTGACTGTGCCCCAGCACCAGGAGGTACGGGGCAAGATGATGTCTGGACACGTGGAGTACCAGATCCTGGTGGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGTTCTTGGTCTCCAAAAAGTACAGCGAGATTGAGGAGTTTTACCAGAAACTGAGCAGTCGTTATGCAGCAGCCAGCCTCCCCCCACTACCCAGGAAGGTCCTGTTTGTTGGGGAGTCTGACATCCGGGAGAGGAGAGCCGTGTTCAATGAGATCCTGCGCTGTGTCTCCAAGGATGCCGAGTTGGCAGGCAGCCCAGAGCTGCTAGAGTTCTTAGGTACCAGATCCCCAGGGGCTGCAGGGCTCACCAGCAGAGATTCCTCTGTCCTGGATGGCACAGACAGTCAGACAGGGAATGATGAAGAGGCTTTCGACTTTTTTGAGGAGCAAGACCAAGTGGCAGAAGAGGGTCCGCCCGTCCAGAGCCTGAAGGGCGAGGATGCTGAGGAATCCTTGGAGGAGGAGGAGGCGCTGGACCCTCTGGGCATTATGCGGTTGGTCTCCTGTTGTTGA
Amino sequence
MQSPAVLVTSRRLQNAHTGLDLTVPQHQEVRGKMMSGHVEYQILVVTRLAAFKSAKHRPEDVVQFLVSKKYSEIEEFYQKLSSRYAAASLPPLPRKVLFVGESDIRERRAVFNEILRCVSKDAELAGSPELLEFLGTRSPGAAGLTSRDSSVLDGTDSQTGNDEEAFDFFEEQDQVAEEGPPVQSLKGEDAEESLEEEEALDPLGIMRLVSCC*