ENST00000260570.8 IFT172

Information
Transcript ID
ENST00000260570.8
Genome
hg19
Position
chr2:27,667,244-27,712,610
Strand
-
CDS length
5,250
Amino acid length
1,750
Gene symbol
IFT172
Gene type
protein-coding
Gene description
intraflagellar transport 172
Gene Entrez Gene ID
26160
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
48 27,667,244 27,667,388
47 27,667,881 27,667,972
46 27,668,163 27,668,316
45 27,668,612 27,668,710
44 27,668,796 27,668,855
43 27,669,127 27,669,222
42 27,670,382 27,670,501
41 27,670,679 27,670,789
40 27,671,782 27,671,898
39 27,672,161 27,672,247
38 27,672,366 27,672,429
37 27,672,558 27,672,667
36 27,672,865 27,672,963
35 27,676,251 27,676,380
34 27,676,497 27,676,606
33 27,676,849 27,677,029
32 27,677,221 27,677,285
31 27,677,434 27,677,527
30 27,679,378 27,679,520
29 27,680,506 27,680,622
28 27,680,708 27,680,843
27 27,680,993 27,681,090
26 27,681,646 27,681,735
25 27,682,245 27,682,389
24 27,682,576 27,682,696
23 27,683,882 27,683,960
22 27,684,136 27,684,384
21 27,684,626 27,684,703
20 27,685,568 27,685,660
19 27,685,964 27,686,048
18 27,688,278 27,688,385
17 27,688,613 27,688,749
16 27,693,795 27,693,962
15 27,695,117 27,695,229
14 27,699,508 27,699,593
13 27,700,084 27,700,187
12 27,700,426 27,700,479
11 27,700,862 27,701,023
10 27,702,376 27,702,471
9 27,702,893 27,703,016
8 27,703,913 27,704,127
7 27,706,156 27,706,243
6 27,706,447 27,706,526
5 27,706,739 27,706,804
4 27,707,094 27,707,133
3 27,707,885 27,707,997
2 27,708,227 27,708,370
1 27,712,482 27,712,610
CDS
Exon number Type Start Stop
48 CDS 27,667,299 27,667,388
47 CDS 27,667,881 27,667,972
46 CDS 27,668,163 27,668,316
45 CDS 27,668,612 27,668,710
44 CDS 27,668,796 27,668,855
43 CDS 27,669,127 27,669,222
42 CDS 27,670,382 27,670,501
41 CDS 27,670,679 27,670,789
40 CDS 27,671,782 27,671,898
39 CDS 27,672,161 27,672,247
38 CDS 27,672,366 27,672,429
37 CDS 27,672,558 27,672,667
36 CDS 27,672,865 27,672,963
35 CDS 27,676,251 27,676,380
34 CDS 27,676,497 27,676,606
33 CDS 27,676,849 27,677,029
32 CDS 27,677,221 27,677,285
31 CDS 27,677,434 27,677,527
30 CDS 27,679,378 27,679,520
29 CDS 27,680,506 27,680,622
28 CDS 27,680,708 27,680,843
27 CDS 27,680,993 27,681,090
26 CDS 27,681,646 27,681,735
25 CDS 27,682,245 27,682,389
24 CDS 27,682,576 27,682,696
23 CDS 27,683,882 27,683,960
22 CDS 27,684,136 27,684,384
21 CDS 27,684,626 27,684,703
20 CDS 27,685,568 27,685,660
19 CDS 27,685,964 27,686,048
18 CDS 27,688,278 27,688,385
17 CDS 27,688,613 27,688,749
16 CDS 27,693,795 27,693,962
15 CDS 27,695,117 27,695,229
14 CDS 27,699,508 27,699,593
13 CDS 27,700,084 27,700,187
12 CDS 27,700,426 27,700,479
11 CDS 27,700,862 27,701,023
10 CDS 27,702,376 27,702,471
9 CDS 27,702,893 27,703,016
8 CDS 27,703,913 27,704,127
7 CDS 27,706,156 27,706,243
6 CDS 27,706,447 27,706,526
5 CDS 27,706,739 27,706,804
4 CDS 27,707,094 27,707,133
3 CDS 27,707,885 27,707,997
2 CDS 27,708,227 27,708,370
1 CDS 27,712,482 27,712,520
Other genome
Genome Chromosome Start End Links
hg38 chr2 27,444,377 27,489,743 Link
CDS sequence
ATGCACTTGAAGCACCTGAGGACCCTGCTGAGCCCTCAGGATGGAGCTGCAAAGGTGACCTGCATGGCTTGGTCCCAGAACAATGCCAAATTTGCTGTCTGCACAGTGGACCGAGTGGTCTTGCTGTATGATGAACATGGAGAACGGAGAGATAAATTCTCCACCAAACCAGCTGACATGAAGTATGGCAGGAAGAGCTATATGGTGAAGGGCATGGCTTTTTCTCCTGATTCCACTAAAATTGCCATAGGACAGACTGACAACATCATCTATGTCTACAAGATTGGAGAAGATTGGGGTGACAAGAAAGTCATCTGCAACAAGTTCATCCAGACGAGTGCTGTCACTTGTCTGCAATGGCCGGCAGAATACATCATTGTCTTTGGACTGGCTGAAGGGAAGGTTCGTTTAGCAAACACCAAAACTAATAAATCATCTACCATCTATGGGACAGAGTCTTACGTGGTGTCCCTGACAACAAATTGCTCTGGGAAAGGAATTCTCTCTGGTCATGCAGATGGTACCATCGTTAGGTATTTCTTTGATGATGAAGGCTCTGGAGAGTCACAGGGGAAGTTGGTTAACCACCCGTGTCCACCCTATGCCTTGGCATGGGCAACCAATAGCATCGTGGCTGCAGGCTGTGATCGGAAAATTGTAGCCTATGGAAAAGAAGGTCACATGCTACAAACTTTTGATTATAGCCGTGACCCTCAGGAGCGGGAGTTCACCACAGCTGTATCAAGTCCTGGGGGCCAGTCTGTTGTGCTAGGAAGTTATGACAGGCTTCGGGTGTTCAACTGGATCCCTCGAAGAAGCATCTGGGAAGAGGCAAAGCCCAAGGAGATTACCAATTTATACACCATCACTGCCTTGGCCTGGAAGCGGGATGGCTCACGGCTCTGTGTGGGCACACTATGTGGTGGGGTGGAACAGTTTGACTGCTGCCTCCGAAGGAGTATTTACAAGAACAAGTTTGAGTTGACGTATGTGGGACCTAGCCAGGTGATTGTGAAGAACCTGTCATCAGGAACCCGAGTGGTGCTCAAGTCACACTATGGCTATGAGGTGGAAGAGGTGAAAATCCTAGGAAAGGAACGTTACTTGGTGGCTCACACATCAGAAACACTGCTGCTGGGGGACCTGAACACTAATCGGCTTAGTGAGATAGCCTGGCAAGGATCTGGTGGCAATGAGAAGTATTTCTTTGAAAATGAGAATGTATGCATGATCTTCAATGCCGGAGAGCTAACCCTGGTGGAATATGGGAATAATGACACCCTGGGTTCTGTACGCACTGAATTCATGAACCCCCACCTCATCAGTGTTCGTATTAATGAGAGGTGTCAGCGAGGAACAGAAGATAATAAGAAATTGGCTTATCTTATTGATATTAAGACTATTGCTATAGTGGATCTGATTGGTGGCTACAACATTGGCACCGTCAGCCATGAGAGCCGTGTGGATTGGCTGGAACTTAATGAGACTGGACACAAGCTCCTCTTCAGGGACCGGAAACTTCGTTTGCATCTGTATGATATTGAAAGCTGCTCTAAGACAATGATCCTCAACTTCTGCTCCTATATGCAGTGGGTCCCAGGAAGTGACGTGCTGGTAGCTCAGAACCGAAACAGTCTGTGTGTATGGTACAACATTGAGGCACCTGAGAGAGTCACCATGTTCACTATTAGGGGTGATGTTATAGGTCTGGAGCGGGGCGGGGGAAAGACCGAGGTGATGGTGATGGAAGGTGTGACTACTGTTGCCTACACATTGGATGAGGGCCTCATCGAGTTTGGAACAGCCATTGATGATGGCAACTACATCCGGGCAACAGCCTTCTTAGAGACTCTGGAAATGACCCCAGAAACAGAGGCAATGTGGAAAACCTTGAGTAAACTGGCACTAGAGGCAAGGCAACTACACATTGCGGAGAGGTGCTTTTCTGCTTTGGGCCAAGTAGCAAAAGCTCGATTCCTGCATGAGACCAATGAGATTGCAGATCAAGTATCCCGGGAATATGGCGGAGAAGGAACAGACTTTTATCAGGTCCGAGCACGTCTAGCCATGCTGGAAAAGAACTACAAACTGGCTGAAATGATCTTTTTGGAACAGAATGCTGTGGAGGAGGCCATGGGCATGTACCAGGAGCTACACCGTTGGGATGAGTGTATCGCTGTGGCTGAAGCCAAGGGGCACCCAGCCCTGGAGAAGCTACGTCGTAGTTACTACCAGTGGCTGATGGACACACAGCAAGAGGAGCGAGCAGGTGAACTACAGGAGAGCCAAGGGGATGGGCTAGCAGCCATCAGCCTCTACCTCAAAGCTGGGCTCCCTGCCAAAGCTGCTCGGCTGGTGCTGACCCGAGAGGAACTGCTAGCCAACACAGAGCTGGTAGAACACATCACTGCAGCCCTTATCAAGGGGGAACTCTACGAAAGGGCAGGTGATCTCTTTGAGAAGATTCACAATCCACAGAAGGCCCTGGAGTGCTACCGTAAAGGCAACGCATTCATGAAAGCGGTAGAGCTGGCTCGATTGGCCTTCCCAGTGGAGGTGGTGAAACTAGAGGAGGCATGGGGGGACCACCTGGTGCAGCAGAAGCAGCTTGATGCAGCCATTAATCACTACATCGAAGCCAGGTGCTCCATTAAGGCAATTGAGGCCGCCCTGGGTGCCCGCCAGTGGAAGAAGGCAATTTATATATTAGATCTACAGGACCGGAACACTGCATCCAAATACTATCCTCTCGTGGCCCAACACTATGCATCCCTGCAGGAGTATGAGATTGCTGAGGAGCTCTATACTAAGGGAGATCGGACAAAAGATGCCATAGACATGTACACCCAGGCTGGTCGTTGGGAACAAGCCCACAAGCTGGCGATGAAATGCATGAGACCAGAAGATGTGTCAGTGCTATACATCACTCAGGCCCAGGAAATGGAGAAGCAGGGCAAGTACCGTGAGGCTGAAAGGCTATATGTGACAGTACAAGAGCCTGATCTTGCCATCACCATGTACAAAAAGCACAAGTTGTATGATGACATGATCCGCCTGGTAGGGAAGCACCATCCAGATCTCCTCAGTGATACACACCTACATCTGGGCAAGGAGCTGGAGGCTGAAGGCCGACTACAGGAGGCTGAGTACCACTACCTCGAGGCCCAGGAATGGAAGGCAACAGTGAACATGTACCGGGCCAGTGGGCTTTGGGAAGAGGCCTACAGGGTGGCCAGAACTCAAGGAGGGGCTAATGCCCACAAACACGTGGCCTATCTGTGGGCAAAGAGCCTGGGAGGAGAGGCTGCAGTTAGACTGCTTAATAAGCTGGGACTCCTGGAAGCTGCTGTTGACCACGCTGCAGACAATTGCTCCTTTGAATTTGCGTTTGAACTCTCTCGGCTGGCCCTCAAGCACAAAACCCCCGAGGTTCATCTCAAATATGCTATGTTCCTGGAGGATGAGGGTAAATTCGAAGAGGCTGAAGCTGAATTCATCAGAGCTGGTAAACCCAAGGAGGCAGTCCTCATGTTTGTCCATAACCAGGATTGGGAGGCAGCTCAGCGTGTGGCTGAGGCTCACGACCCTGACAGTGTCGCCGAGGTGCTTGTGGGACAGGCCCGGGGGGCCTTGGAGGAGAAGGACTTTCAGAAAGCAGAAGGGCTGCTGCTCCGGGCCCAGAGACCAGGCCTGGCCCTCAATTATTATAAGGAGGCTGGATTATGGAGTGACGCTCTGCGCATCTGCAAGGACTATGTGCCCAGCCAGCTGGAGGCTCTGCAGGAAGAATATGAGCGGGAAGCTACTAAGAAGGGGGCCAGGGGTGTGGAGGGATTTGTGGAACAAGCTCGACACTGGGAGCAGGCTGGAGAGTACAGCCGTGCCGTGGACTGCTACCTCAAAGTGCGAGACTCTGGAAACAGCGGCCTGGCGGAGAAGTGCTGGATGAAGGCAGCTGAACTCTCCATCAAGTTTCTGCCTCCCCAACGTAATATGGAAGTCGTTCTGGCTGTAGGACCCCAGCTGATTGGAATTGGAAAGCACAGTGCAGCTGCAGAGCTCTATCTGAATCTGGACCTTGTCAAGGAAGCAATCGATGCTTTCATCGAGGGTGAGGAGTGGAACAAGGCGAAGCGTGTAGCTAAGGAGTTAGATCCCAGGTATGAAGACTATGTGGACCAGCATTATAAAGAGTTCCTCAAGAATCAGGGCAAAGTGGACTCGCTGGTGGGTGTGGATGTGATAGCTGCTTTGGACCTGTATGTGGAGCAGGGCCAGTGGGACAAGTGCATTGAAACAGCTACCAAGCAGAACTACAAGATTCTGCACAAGTATGTGGCTTTGTATGCAACTCACTTGATCCGGGAGGGTAGCTCTGCCCAGGCATTGGCCCTGTATGTACAGCACGGAGCCCCTGCTAACCCACAGAACTTCAATATCTACAAAAGGATCTTCACTGACATGGTGAGCTCTCCTGGAACCAACTGTGCCGAGGCCTATCATAGCTGGGCTGATCTTCGAGATGTCCTCTTCAACCTGTGTGAAAACCTGGTGAAGTCCAGTGAGGCAAACTCTCCAGCCCATGAGGAGTTCAAGACGATGCTGCTGATCGCTCATTACTATGCCACGCGCTCTGCAGCCCAGAGTGTCAAACAGCTGGAAACCGTGGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACTACCTGTAGACAAAGCCTTCTATGAAGCAGGCATTGCTGCCAAGGCAGTTGGCTGGGATAACATGGCATTCATCTTCCTCAATCGCTTTTTGGACCTGACCGATGCAATCGAGGAAGGGACTCTAGATGGCCTTGACCACTCTGATTTTCAGGATACAGACATTCCCTTTGAGGTGCCACTCCCAGCTAAGCAGCATGTACCGGAGGCTGAGAGAGAAGAGGTTCGAGACTGGGTGCTTACAGTCTCCATGGACCAGCGGCTGGAGCAGGTTCTGCCTCGGGATGAGCGTGGCGCCTACGAGGCCTCCCTAGTGGCAGCGAGCACTGGTGTTCGAGCCCTGCCCTGCCTTATTACAGGATACCCCATTCTGAGGAACAAAATTGAATTTAAGCGGCCAGGGAAGGCTGCTAACAAGGACAACTGGAATAAATTCCTTATGGCCATCAAGACCTCCCACAGCCCAGTGTGCCAGGACGTGCTGAAATTCATCAGTCAGTGGTGTGGAGGGCTCCCCAGCACCAGCTTTTCCTTTCAGTAG
Amino sequence
MHLKHLRTLLSPQDGAAKVTCMAWSQNNAKFAVCTVDRVVLLYDEHGERRDKFSTKPADMKYGRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQWPAEYIIVFGLAEGKVRLANTKTNKSSTIYGTESYVVSLTTNCSGKGILSGHADGTIVRYFFDDEGSGESQGKLVNHPCPPYALAWATNSIVAAGCDRKIVAYGKEGHMLQTFDYSRDPQEREFTTAVSSPGGQSVVLGSYDRLRVFNWIPRRSIWEEAKPKEITNLYTITALAWKRDGSRLCVGTLCGGVEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSSGTRVVLKSHYGYEVEEVKILGKERYLVAHTSETLLLGDLNTNRLSEIAWQGSGGNEKYFFENENVCMIFNAGELTLVEYGNNDTLGSVRTEFMNPHLISVRINERCQRGTEDNKKLAYLIDIKTIAIVDLIGGYNIGTVSHESRVDWLELNETGHKLLFRDRKLRLHLYDIESCSKTMILNFCSYMQWVPGSDVLVAQNRNSLCVWYNIEAPERVTMFTIRGDVIGLERGGGKTEVMVMEGVTTVAYTLDEGLIEFGTAIDDGNYIRATAFLETLEMTPETEAMWKTLSKLALEARQLHIAERCFSALGQVAKARFLHETNEIADQVSREYGGEGTDFYQVRARLAMLEKNYKLAEMIFLEQNAVEEAMGMYQELHRWDECIAVAEAKGHPALEKLRRSYYQWLMDTQQEERAGELQESQGDGLAAISLYLKAGLPAKAARLVLTREELLANTELVEHITAALIKGELYERAGDLFEKIHNPQKALECYRKGNAFMKAVELARLAFPVEVVKLEEAWGDHLVQQKQLDAAINHYIEARCSIKAIEAALGARQWKKAIYILDLQDRNTASKYYPLVAQHYASLQEYEIAEELYTKGDRTKDAIDMYTQAGRWEQAHKLAMKCMRPEDVSVLYITQAQEMEKQGKYREAERLYVTVQEPDLAITMYKKHKLYDDMIRLVGKHHPDLLSDTHLHLGKELEAEGRLQEAEYHYLEAQEWKATVNMYRASGLWEEAYRVARTQGGANAHKHVAYLWAKSLGGEAAVRLLNKLGLLEAAVDHAADNCSFEFAFELSRLALKHKTPEVHLKYAMFLEDEGKFEEAEAEFIRAGKPKEAVLMFVHNQDWEAAQRVAEAHDPDSVAEVLVGQARGALEEKDFQKAEGLLLRAQRPGLALNYYKEAGLWSDALRICKDYVPSQLEALQEEYEREATKKGARGVEGFVEQARHWEQAGEYSRAVDCYLKVRDSGNSGLAEKCWMKAAELSIKFLPPQRNMEVVLAVGPQLIGIGKHSAAAELYLNLDLVKEAIDAFIEGEEWNKAKRVAKELDPRYEDYVDQHYKEFLKNQGKVDSLVGVDVIAALDLYVEQGQWDKCIETATKQNYKILHKYVALYATHLIREGSSAQALALYVQHGAPANPQNFNIYKRIFTDMVSSPGTNCAEAYHSWADLRDVLFNLCENLVKSSEANSPAHEEFKTMLLIAHYYATRSAAQSVKQLETVAARLSVSLLRHTQLLPVDKAFYEAGIAAKAVGWDNMAFIFLNRFLDLTDAIEEGTLDGLDHSDFQDTDIPFEVPLPAKQHVPEAEREEVRDWVLTVSMDQRLEQVLPRDERGAYEASLVAASTGVRALPCLITGYPILRNKIEFKRPGKAANKDNWNKFLMAIKTSHSPVCQDVLKFISQWCGGLPSTSFSFQ*