ENST00000260570.8 IFT172

Information
Transcript ID
ENST00000260570.8
Genome
hg38
Position
chr2:27,444,377-27,489,743
Strand
-
CDS length
5,250
Amino acid length
1,750
Gene symbol
IFT172
Gene type
protein-coding
Gene description
intraflagellar transport 172
Gene Entrez Gene ID
26160
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
48 27,444,377 27,444,521
47 27,445,014 27,445,105
46 27,445,296 27,445,449
45 27,445,745 27,445,843
44 27,445,929 27,445,988
43 27,446,260 27,446,355
42 27,447,515 27,447,634
41 27,447,812 27,447,922
40 27,448,915 27,449,031
39 27,449,294 27,449,380
38 27,449,499 27,449,562
37 27,449,691 27,449,800
36 27,449,998 27,450,096
35 27,453,384 27,453,513
34 27,453,630 27,453,739
33 27,453,982 27,454,162
32 27,454,354 27,454,418
31 27,454,567 27,454,660
30 27,456,511 27,456,653
29 27,457,639 27,457,755
28 27,457,841 27,457,976
27 27,458,126 27,458,223
26 27,458,779 27,458,868
25 27,459,378 27,459,522
24 27,459,709 27,459,829
23 27,461,015 27,461,093
22 27,461,269 27,461,517
21 27,461,759 27,461,836
20 27,462,701 27,462,793
19 27,463,097 27,463,181
18 27,465,411 27,465,518
17 27,465,746 27,465,882
16 27,470,928 27,471,095
15 27,472,250 27,472,362
14 27,476,641 27,476,726
13 27,477,217 27,477,320
12 27,477,559 27,477,612
11 27,477,995 27,478,156
10 27,479,509 27,479,604
9 27,480,026 27,480,149
8 27,481,046 27,481,260
7 27,483,289 27,483,376
6 27,483,580 27,483,659
5 27,483,872 27,483,937
4 27,484,227 27,484,266
3 27,485,018 27,485,130
2 27,485,360 27,485,503
1 27,489,615 27,489,743
CDS
Exon number Type Start Stop
48 CDS 27,444,432 27,444,521
47 CDS 27,445,014 27,445,105
46 CDS 27,445,296 27,445,449
45 CDS 27,445,745 27,445,843
44 CDS 27,445,929 27,445,988
43 CDS 27,446,260 27,446,355
42 CDS 27,447,515 27,447,634
41 CDS 27,447,812 27,447,922
40 CDS 27,448,915 27,449,031
39 CDS 27,449,294 27,449,380
38 CDS 27,449,499 27,449,562
37 CDS 27,449,691 27,449,800
36 CDS 27,449,998 27,450,096
35 CDS 27,453,384 27,453,513
34 CDS 27,453,630 27,453,739
33 CDS 27,453,982 27,454,162
32 CDS 27,454,354 27,454,418
31 CDS 27,454,567 27,454,660
30 CDS 27,456,511 27,456,653
29 CDS 27,457,639 27,457,755
28 CDS 27,457,841 27,457,976
27 CDS 27,458,126 27,458,223
26 CDS 27,458,779 27,458,868
25 CDS 27,459,378 27,459,522
24 CDS 27,459,709 27,459,829
23 CDS 27,461,015 27,461,093
22 CDS 27,461,269 27,461,517
21 CDS 27,461,759 27,461,836
20 CDS 27,462,701 27,462,793
19 CDS 27,463,097 27,463,181
18 CDS 27,465,411 27,465,518
17 CDS 27,465,746 27,465,882
16 CDS 27,470,928 27,471,095
15 CDS 27,472,250 27,472,362
14 CDS 27,476,641 27,476,726
13 CDS 27,477,217 27,477,320
12 CDS 27,477,559 27,477,612
11 CDS 27,477,995 27,478,156
10 CDS 27,479,509 27,479,604
9 CDS 27,480,026 27,480,149
8 CDS 27,481,046 27,481,260
7 CDS 27,483,289 27,483,376
6 CDS 27,483,580 27,483,659
5 CDS 27,483,872 27,483,937
4 CDS 27,484,227 27,484,266
3 CDS 27,485,018 27,485,130
2 CDS 27,485,360 27,485,503
1 CDS 27,489,615 27,489,653
Other genome
Genome Chromosome Start End Links
hg19 chr2 27,667,244 27,712,610 Link
CDS sequence
ATGCACTTGAAGCACCTGAGGACCCTGCTGAGCCCTCAGGATGGAGCTGCAAAGGTGACCTGCATGGCTTGGTCCCAGAACAATGCCAAATTTGCTGTCTGCACAGTGGACCGAGTGGTCTTGCTGTATGATGAACATGGAGAACGGAGAGATAAATTCTCCACCAAACCAGCTGACATGAAGTATGGCAGGAAGAGCTATATGGTGAAGGGCATGGCTTTTTCTCCTGATTCCACTAAAATTGCCATAGGACAGACTGACAACATCATCTATGTCTACAAGATTGGAGAAGATTGGGGTGACAAGAAAGTCATCTGCAACAAGTTCATCCAGACGAGTGCTGTCACTTGTCTGCAATGGCCGGCAGAATACATCATTGTCTTTGGACTGGCTGAAGGGAAGGTTCGTTTAGCAAACACCAAAACTAATAAATCATCTACCATCTATGGGACAGAGTCTTACGTGGTGTCCCTGACAACAAATTGCTCTGGGAAAGGAATTCTCTCTGGTCATGCAGATGGTACCATCGTTAGGTATTTCTTTGATGATGAAGGCTCTGGAGAGTCACAGGGGAAGTTGGTTAACCACCCGTGTCCACCCTATGCCTTGGCATGGGCAACCAATAGCATCGTGGCTGCAGGCTGTGATCGGAAAATTGTAGCCTATGGAAAAGAAGGTCACATGCTACAAACTTTTGATTATAGCCGTGACCCTCAGGAGCGGGAGTTCACCACAGCTGTATCAAGTCCTGGGGGCCAGTCTGTTGTGCTAGGAAGTTATGACAGGCTTCGGGTGTTCAACTGGATCCCTCGAAGAAGCATCTGGGAAGAGGCAAAGCCCAAGGAGATTACCAATTTATACACCATCACTGCCTTGGCCTGGAAGCGGGATGGCTCACGGCTCTGTGTGGGCACACTATGTGGTGGGGTGGAACAGTTTGACTGCTGCCTCCGAAGGAGTATTTACAAGAACAAGTTTGAGTTGACGTATGTGGGACCTAGCCAGGTGATTGTGAAGAACCTGTCATCAGGAACCCGAGTGGTGCTCAAGTCACACTATGGCTATGAGGTGGAAGAGGTGAAAATCCTAGGAAAGGAACGTTACTTGGTGGCTCACACATCAGAAACACTGCTGCTGGGGGACCTGAACACTAATCGGCTTAGTGAGATAGCCTGGCAAGGATCTGGTGGCAATGAGAAGTATTTCTTTGAAAATGAGAATGTATGCATGATCTTCAATGCCGGAGAGCTAACCCTGGTGGAATATGGGAATAATGACACCCTGGGTTCTGTACGCACTGAATTCATGAACCCCCACCTCATCAGTGTTCGTATTAATGAGAGGTGTCAGCGAGGAACAGAAGATAATAAGAAATTGGCTTATCTTATTGATATTAAGACTATTGCTATAGTGGATCTGATTGGTGGCTACAACATTGGCACCGTCAGCCATGAGAGCCGTGTGGATTGGCTGGAACTTAATGAGACTGGACACAAGCTCCTCTTCAGGGACCGGAAACTTCGTTTGCATCTGTATGATATTGAAAGCTGCTCTAAGACAATGATCCTCAACTTCTGCTCCTATATGCAGTGGGTCCCAGGAAGTGACGTGCTGGTAGCTCAGAACCGAAACAGTCTGTGTGTATGGTACAACATTGAGGCACCTGAGAGAGTCACCATGTTCACTATTAGGGGTGATGTTATAGGTCTGGAGCGGGGCGGGGGAAAGACCGAGGTGATGGTGATGGAAGGTGTGACTACTGTTGCCTACACATTGGATGAGGGCCTCATCGAGTTTGGAACAGCCATTGATGATGGCAACTACATCCGGGCAACAGCCTTCTTAGAGACTCTGGAAATGACCCCAGAAACAGAGGCAATGTGGAAAACCTTGAGTAAACTGGCACTAGAGGCAAGGCAACTACACATTGCGGAGAGGTGCTTTTCTGCTTTGGGCCAAGTAGCAAAAGCTCGATTCCTGCATGAGACCAATGAGATTGCAGATCAAGTATCCCGGGAATATGGCGGAGAAGGAACAGACTTTTATCAGGTCCGAGCACGTCTAGCCATGCTGGAAAAGAACTACAAACTGGCTGAAATGATCTTTTTGGAACAGAATGCTGTGGAGGAGGCCATGGGCATGTACCAGGAGCTACACCGTTGGGATGAGTGTATCGCTGTGGCTGAAGCCAAGGGGCACCCAGCCCTGGAGAAGCTACGTCGTAGTTACTACCAGTGGCTGATGGACACACAGCAAGAGGAGCGAGCAGGTGAACTACAGGAGAGCCAAGGGGATGGGCTAGCAGCCATCAGCCTCTACCTCAAAGCTGGGCTCCCTGCCAAAGCTGCTCGGCTGGTGCTGACCCGAGAGGAACTGCTAGCCAACACAGAGCTGGTAGAACACATCACTGCAGCCCTTATCAAGGGGGAACTCTACGAAAGGGCAGGTGATCTCTTTGAGAAGATTCACAATCCACAGAAGGCCCTGGAGTGCTACCGTAAAGGCAACGCATTCATGAAAGCGGTAGAGCTGGCTCGATTGGCCTTCCCAGTGGAGGTGGTGAAACTAGAGGAGGCATGGGGGGACCACCTGGTGCAGCAGAAGCAGCTTGATGCAGCCATTAATCACTACATCGAAGCCAGGTGCTCCATTAAGGCAATTGAGGCCGCCCTGGGTGCCCGCCAGTGGAAGAAGGCAATTTATATATTAGATCTACAGGACCGGAACACTGCATCCAAATACTATCCTCTCGTGGCCCAACACTATGCATCCCTGCAGGAGTATGAGATTGCTGAGGAGCTCTATACTAAGGGAGATCGGACAAAAGATGCCATAGACATGTACACCCAGGCTGGTCGTTGGGAACAAGCCCACAAGCTGGCGATGAAATGCATGAGACCAGAAGATGTGTCAGTGCTATACATCACTCAGGCCCAGGAAATGGAGAAGCAGGGCAAGTACCGTGAGGCTGAAAGGCTATATGTGACAGTACAAGAGCCTGATCTTGCCATCACCATGTACAAAAAGCACAAGTTGTATGATGACATGATCCGCCTGGTAGGGAAGCACCATCCAGATCTCCTCAGTGATACACACCTACATCTGGGCAAGGAGCTGGAGGCTGAAGGCCGACTACAGGAGGCTGAGTACCACTACCTCGAGGCCCAGGAATGGAAGGCAACAGTGAACATGTACCGGGCCAGTGGGCTTTGGGAAGAGGCCTACAGGGTGGCCAGAACTCAAGGAGGGGCTAATGCCCACAAACACGTGGCCTATCTGTGGGCAAAGAGCCTGGGAGGAGAGGCTGCAGTTAGACTGCTTAATAAGCTGGGACTCCTGGAAGCTGCTGTTGACCACGCTGCAGACAATTGCTCCTTTGAATTTGCGTTTGAACTCTCTCGGCTGGCCCTCAAGCACAAAACCCCCGAGGTTCATCTCAAATATGCTATGTTCCTGGAGGATGAGGGTAAATTCGAAGAGGCTGAAGCTGAATTCATCAGAGCTGGTAAACCCAAGGAGGCAGTCCTCATGTTTGTCCATAACCAGGATTGGGAGGCAGCTCAGCGTGTGGCTGAGGCTCACGACCCTGACAGTGTCGCCGAGGTGCTTGTGGGACAGGCCCGGGGGGCCTTGGAGGAGAAGGACTTTCAGAAAGCAGAAGGGCTGCTGCTCCGGGCCCAGAGACCAGGCCTGGCCCTCAATTATTATAAGGAGGCTGGATTATGGAGTGACGCTCTGCGCATCTGCAAGGACTATGTGCCCAGCCAGCTGGAGGCTCTGCAGGAAGAATATGAGCGGGAAGCTACTAAGAAGGGGGCCAGGGGTGTGGAGGGATTTGTGGAACAAGCTCGACACTGGGAGCAGGCTGGAGAGTACAGCCGTGCCGTGGACTGCTACCTCAAAGTGCGAGACTCTGGAAACAGCGGCCTGGCGGAGAAGTGCTGGATGAAGGCAGCTGAACTCTCCATCAAGTTTCTGCCTCCCCAACGTAATATGGAAGTCGTTCTGGCTGTAGGACCCCAGCTGATTGGAATTGGAAAGCACAGTGCAGCTGCAGAGCTCTATCTGAATCTGGACCTTGTCAAGGAAGCAATCGATGCTTTCATCGAGGGTGAGGAGTGGAACAAGGCGAAGCGTGTAGCTAAGGAGTTAGATCCCAGGTATGAAGACTATGTGGACCAGCATTATAAAGAGTTCCTCAAGAATCAGGGCAAAGTGGACTCGCTGGTGGGTGTGGATGTGATAGCTGCTTTGGACCTGTATGTGGAGCAGGGCCAGTGGGACAAGTGCATTGAAACAGCTACCAAGCAGAACTACAAGATTCTGCACAAGTATGTGGCTTTGTATGCAACTCACTTGATCCGGGAGGGTAGCTCTGCCCAGGCATTGGCCCTGTATGTACAGCACGGAGCCCCTGCTAACCCACAGAACTTCAATATCTACAAAAGGATCTTCACTGACATGGTGAGCTCTCCTGGAACCAACTGTGCCGAGGCCTATCATAGCTGGGCTGATCTTCGAGATGTCCTCTTCAACCTGTGTGAAAACCTGGTGAAGTCCAGTGAGGCAAACTCTCCAGCCCATGAGGAGTTCAAGACGATGCTGCTGATCGCTCATTACTATGCCACGCGCTCTGCAGCCCAGAGTGTCAAACAGCTGGAAACCGTGGCTGCCAGGCTTTCTGTTTCACTCTTGCGTCACACCCAGCTACTACCTGTAGACAAAGCCTTCTATGAAGCAGGCATTGCTGCCAAGGCAGTTGGCTGGGATAACATGGCATTCATCTTCCTCAATCGCTTTTTGGACCTGACCGATGCAATCGAGGAAGGGACTCTAGATGGCCTTGACCACTCTGATTTTCAGGATACAGACATTCCCTTTGAGGTGCCACTCCCAGCTAAGCAGCATGTACCGGAGGCTGAGAGAGAAGAGGTTCGAGACTGGGTGCTTACAGTCTCCATGGACCAGCGGCTGGAGCAGGTTCTGCCTCGGGATGAGCGTGGCGCCTACGAGGCCTCCCTAGTGGCAGCGAGCACTGGTGTTCGAGCCCTGCCCTGCCTTATTACAGGATACCCCATTCTGAGGAACAAAATTGAATTTAAGCGGCCAGGGAAGGCTGCTAACAAGGACAACTGGAATAAATTCCTTATGGCCATCAAGACCTCCCACAGCCCAGTGTGCCAGGACGTGCTGAAATTCATCAGTCAGTGGTGTGGAGGGCTCCCCAGCACCAGCTTTTCCTTTCAGTAG
Amino sequence
MHLKHLRTLLSPQDGAAKVTCMAWSQNNAKFAVCTVDRVVLLYDEHGERRDKFSTKPADMKYGRKSYMVKGMAFSPDSTKIAIGQTDNIIYVYKIGEDWGDKKVICNKFIQTSAVTCLQWPAEYIIVFGLAEGKVRLANTKTNKSSTIYGTESYVVSLTTNCSGKGILSGHADGTIVRYFFDDEGSGESQGKLVNHPCPPYALAWATNSIVAAGCDRKIVAYGKEGHMLQTFDYSRDPQEREFTTAVSSPGGQSVVLGSYDRLRVFNWIPRRSIWEEAKPKEITNLYTITALAWKRDGSRLCVGTLCGGVEQFDCCLRRSIYKNKFELTYVGPSQVIVKNLSSGTRVVLKSHYGYEVEEVKILGKERYLVAHTSETLLLGDLNTNRLSEIAWQGSGGNEKYFFENENVCMIFNAGELTLVEYGNNDTLGSVRTEFMNPHLISVRINERCQRGTEDNKKLAYLIDIKTIAIVDLIGGYNIGTVSHESRVDWLELNETGHKLLFRDRKLRLHLYDIESCSKTMILNFCSYMQWVPGSDVLVAQNRNSLCVWYNIEAPERVTMFTIRGDVIGLERGGGKTEVMVMEGVTTVAYTLDEGLIEFGTAIDDGNYIRATAFLETLEMTPETEAMWKTLSKLALEARQLHIAERCFSALGQVAKARFLHETNEIADQVSREYGGEGTDFYQVRARLAMLEKNYKLAEMIFLEQNAVEEAMGMYQELHRWDECIAVAEAKGHPALEKLRRSYYQWLMDTQQEERAGELQESQGDGLAAISLYLKAGLPAKAARLVLTREELLANTELVEHITAALIKGELYERAGDLFEKIHNPQKALECYRKGNAFMKAVELARLAFPVEVVKLEEAWGDHLVQQKQLDAAINHYIEARCSIKAIEAALGARQWKKAIYILDLQDRNTASKYYPLVAQHYASLQEYEIAEELYTKGDRTKDAIDMYTQAGRWEQAHKLAMKCMRPEDVSVLYITQAQEMEKQGKYREAERLYVTVQEPDLAITMYKKHKLYDDMIRLVGKHHPDLLSDTHLHLGKELEAEGRLQEAEYHYLEAQEWKATVNMYRASGLWEEAYRVARTQGGANAHKHVAYLWAKSLGGEAAVRLLNKLGLLEAAVDHAADNCSFEFAFELSRLALKHKTPEVHLKYAMFLEDEGKFEEAEAEFIRAGKPKEAVLMFVHNQDWEAAQRVAEAHDPDSVAEVLVGQARGALEEKDFQKAEGLLLRAQRPGLALNYYKEAGLWSDALRICKDYVPSQLEALQEEYEREATKKGARGVEGFVEQARHWEQAGEYSRAVDCYLKVRDSGNSGLAEKCWMKAAELSIKFLPPQRNMEVVLAVGPQLIGIGKHSAAAELYLNLDLVKEAIDAFIEGEEWNKAKRVAKELDPRYEDYVDQHYKEFLKNQGKVDSLVGVDVIAALDLYVEQGQWDKCIETATKQNYKILHKYVALYATHLIREGSSAQALALYVQHGAPANPQNFNIYKRIFTDMVSSPGTNCAEAYHSWADLRDVLFNLCENLVKSSEANSPAHEEFKTMLLIAHYYATRSAAQSVKQLETVAARLSVSLLRHTQLLPVDKAFYEAGIAAKAVGWDNMAFIFLNRFLDLTDAIEEGTLDGLDHSDFQDTDIPFEVPLPAKQHVPEAEREEVRDWVLTVSMDQRLEQVLPRDERGAYEASLVAASTGVRALPCLITGYPILRNKIEFKRPGKAANKDNWNKFLMAIKTSHSPVCQDVLKFISQWCGGLPSTSFSFQ*