ENST00000238875.10 LGALSL

Information
Transcript ID
ENST00000238875.10
Genome
hg19
Position
chr2:64,681,296-64,688,515
Strand
+
CDS length
519
Amino acid length
173
Gene symbol
LGALSL
Gene type
protein-coding
Gene description
galectin like
Gene Entrez Gene ID
29094
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 64,681,296 64,681,715
2 64,682,478 64,682,549
3 64,682,723 64,682,811
4 64,683,422 64,683,599
5 64,685,419 64,688,515
CDS
Exon number Type Start Stop
1 CDS 64,681,680 64,681,715
2 CDS 64,682,478 64,682,549
3 CDS 64,682,723 64,682,811
4 CDS 64,683,422 64,683,599
5 CDS 64,685,419 64,685,562
Other genome
Genome Chromosome Start End Links
hg38 chr2 64,454,162 64,461,381 Link
CDS sequence
ATGGCGGGATCAGTGGCCGACAGCGATGCCGTGGTGAAACTAGATGATGGCCATTTAAACAACTCTTTGAGCTCTCCAGTTCAAGCGGACGTGTACTTCCCACGACTGATAGTTCCATTTTGTGGGCACATTAAAGGTGGCATGAGACCAGGCAAGAAGGTGTTAGTGATGGGCATCGTAGACCTCAACCCAGAGAGCTTTGCAATCAGCTTGACCTGTGGGGACTCAGAAGACCCTCCTGCCGATGTGGCAATCGAACTCAAAGCTGTGTTCACAGATCGGCAGCTACTCAGAAATTCTTGTATATCTGGGGAGAGGGGTGAAGAACAGTCAGCAATCCCTTACTTTCCATTCATTCCAGACCAGCCATTCAGGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTACCATCGCATTCAAACGTTATCTGCAATTGACACCATAAAGATAAATGGAGACCTCCAGATCACCAAGCTTGGCTGA
Amino sequence
MAGSVADSDAVVKLDDGHLNNSLSSPVQADVYFPRLIVPFCGHIKGGMRPGKKVLVMGIVDLNPESFAISLTCGDSEDPPADVAIELKAVFTDRQLLRNSCISGERGEEQSAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQTLSAIDTIKINGDLQITKLG*