ENST00000238875.10 LGALSL

Information
Transcript ID
ENST00000238875.10
Genome
hg38
Position
chr2:64,454,162-64,461,381
Strand
+
CDS length
519
Amino acid length
173
Gene symbol
LGALSL
Gene type
protein-coding
Gene description
galectin like
Gene Entrez Gene ID
29094
Variants

Display target variant


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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 64,454,162 64,454,581
2 64,455,344 64,455,415
3 64,455,589 64,455,677
4 64,456,288 64,456,465
5 64,458,285 64,461,381
CDS
Exon number Type Start Stop
1 CDS 64,454,546 64,454,581
2 CDS 64,455,344 64,455,415
3 CDS 64,455,589 64,455,677
4 CDS 64,456,288 64,456,465
5 CDS 64,458,285 64,458,428
Other genome
Genome Chromosome Start End Links
hg19 chr2 64,681,296 64,688,515 Link
CDS sequence
ATGGCGGGATCAGTGGCCGACAGCGATGCCGTGGTGAAACTAGATGATGGCCATTTAAACAACTCTTTGAGCTCTCCAGTTCAAGCGGACGTGTACTTCCCACGACTGATAGTTCCATTTTGTGGGCACATTAAAGGTGGCATGAGACCAGGCAAGAAGGTGTTAGTGATGGGCATCGTAGACCTCAACCCAGAGAGCTTTGCAATCAGCTTGACCTGTGGGGACTCAGAAGACCCTCCTGCCGATGTGGCAATCGAACTCAAAGCTGTGTTCACAGATCGGCAGCTACTCAGAAATTCTTGTATATCTGGGGAGAGGGGTGAAGAACAGTCAGCAATCCCTTACTTTCCATTCATTCCAGACCAGCCATTCAGGGTGGAAATTCTTTGTGAGCACCCACGTTTCCGAGTGTTTGTGGATGGACACCAACTTTTTGATTTTTACCATCGCATTCAAACGTTATCTGCAATTGACACCATAAAGATAAATGGAGACCTCCAGATCACCAAGCTTGGCTGA
Amino sequence
MAGSVADSDAVVKLDDGHLNNSLSSPVQADVYFPRLIVPFCGHIKGGMRPGKKVLVMGIVDLNPESFAISLTCGDSEDPPADVAIELKAVFTDRQLLRNSCISGERGEEQSAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYHRIQTLSAIDTIKINGDLQITKLG*