ENST00000303795.9 APLF
Information
- Transcript ID
- ENST00000303795.9
- Genome
- hg19
- Position
- chr2:68,694,717-68,807,294
- Strand
- +
- CDS length
- 1,536
- Amino acid length
- 512
- Gene symbol
- APLF
- Gene type
- protein-coding
- Gene description
- aprataxin and PNKP like factor
- Gene Entrez Gene ID
- 200558
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 68,694,717 | 68,694,959 |
| 2 | 68,717,322 | 68,717,393 |
| 3 | 68,729,863 | 68,730,035 |
| 4 | 68,740,212 | 68,740,359 |
| 5 | 68,740,680 | 68,740,812 |
| 6 | 68,753,193 | 68,753,374 |
| 7 | 68,765,004 | 68,765,359 |
| 8 | 68,772,319 | 68,772,444 |
| 9 | 68,794,473 | 68,794,519 |
| 10 | 68,804,952 | 68,807,294 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 68,694,864 | 68,694,959 |
| 2 | CDS | 68,717,322 | 68,717,393 |
| 3 | CDS | 68,729,863 | 68,730,035 |
| 4 | CDS | 68,740,212 | 68,740,359 |
| 5 | CDS | 68,740,680 | 68,740,812 |
| 6 | CDS | 68,753,193 | 68,753,374 |
| 7 | CDS | 68,765,004 | 68,765,359 |
| 8 | CDS | 68,772,319 | 68,772,444 |
| 9 | CDS | 68,794,473 | 68,794,519 |
| 10 | CDS | 68,804,952 | 68,805,154 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr2 | 68,467,585 | 68,580,162 | Link |
CDS sequence
ATGTCCGGGGGCTTCGAGCTGCAGCCGCGGGACGGCGGTCCCCGGGTGGCCCTGGCGCCCGGGGAGACGGTGATCGGCCGCGGGCCGCTGCTGGGAATAACAGACAAGAGAGTATCCAGAAGACATGCCATTCTTGAGGTGGCAGGTGGTCAGCTGCGAATCAAACCGATACACACAAATCCATGTTTTTACCAGTCTTCAGAGAAGAGTCAGCTCTTACCATTGAAGCCAAATCTATGGTGCTATTTGAATCCTGGAGACAGCTTTTCTTTGTTAGTTGACAAATACATTTTCCGCATTCTCTCTATACCCTCTGAAGTGGAAATGCAATGTACCTTAAGAAACAGTCAAGTGCTTGATGAAGATAATATATTGAATGAAACACCAAAATCCCCCGTGATTAATTTACCTCATGAGACTACTGGTGCCTCACAACTGGAAGGAAGCACAGAAATAGCCAAGACCCAGATGACTCCCACAAATAGTGTGTCTTTCCTAGGTGAAAATAGAGACTGCAATAAGCAGCAGCCAATCCTTGCCGAGAGGAAAAGAATCCTTCCAACTTGGATGTTAGCAGAACATTTAAGTGATCAAAACCTTTCAGTACCAGCAATCAGTGGAGGTAATGTAATCCAGGGAAGTGGAAAAGAAGAAATCTGCAAAGATAAATCCCAGCTAAACACAACCCAGCAAGGAAGAAGGCAATTAATTTCATCAGGAAGTTCAGAAAATACATCAGCAGAACAAGACACAGGAGAAGAGTGCAAAAATACTGATCAGGAAGAGTCTACCATTTCATCCAAGGAAATGCCACAATCATTTTCTGCAATCACATTAAGTAACACAGAGATGAATAATATTAAGACTAATGCACAGAGAAACAAACTTCCAATAGAGGAACTTGGTAAAGTTTCTAAACATAAAATTGCCACTAAAAGAACACCACATAAAGAAGATGAGGCAATGAGCTGTTCTGAAAATTGTTCGAGTGCCCAGGGCGACTCACTTCAGGATGAGTCTCAAGGGTCTCATTCTGAGTCCAGCTCTAATCCCTCCAATCCTGAAACTTTGCATGCAAAGGCAACTGATTCAGTTCTACAAGGTTCTGAAGGAAACAAGGTCAAGAGGACATCCTGCATGTATGGGGCAAACTGCTATAGGAAGAATCCTGTTCATTTTCAACATTTTAGCCATCCTGGTGATAGTGATTATGGAGGTGTACAAATCGTGGGCCAAGATGAGACTGATGACCGGCCTGAATGTCCCTATGGACCATCCTGTTATAGGAAGAATCCCCAGCACAAGATAGAATATAGACATAATACGCTTCCAGTGAGAAATGTTTTAGATGAAGATAATGATAATGTTGGGCAACCCAATGAGTATGACCTGAACGACAGCTTTCTAGATGATGAGGAAGAAGACTATGAGCCAACAGATGAAGATTCTGACTGGGAACCAGGAAAGGAAGATGAAGAGAAGGAAGATGTGGAAGAGCTTTTGAAAGAAGCAAAAAGGTTTATGAAAAGAAAATAG
Amino sequence
MSGGFELQPRDGGPRVALAPGETVIGRGPLLGITDKRVSRRHAILEVAGGQLRIKPIHTNPCFYQSSEKSQLLPLKPNLWCYLNPGDSFSLLVDKYIFRILSIPSEVEMQCTLRNSQVLDEDNILNETPKSPVINLPHETTGASQLEGSTEIAKTQMTPTNSVSFLGENRDCNKQQPILAERKRILPTWMLAEHLSDQNLSVPAISGGNVIQGSGKEEICKDKSQLNTTQQGRRQLISSGSSENTSAEQDTGEECKNTDQEESTISSKEMPQSFSAITLSNTEMNNIKTNAQRNKLPIEELGKVSKHKIATKRTPHKEDEAMSCSENCSSAQGDSLQDESQGSHSESSSNPSNPETLHAKATDSVLQGSEGNKVKRTSCMYGANCYRKNPVHFQHFSHPGDSDYGGVQIVGQDETDDRPECPYGPSCYRKNPQHKIEYRHNTLPVRNVLDEDNDNVGQPNEYDLNDSFLDDEEEDYEPTDEDSDWEPGKEDEEKEDVEELLKEAKRFMKRK*