ENST00000303795.9 APLF

Information
Transcript ID
ENST00000303795.9
Genome
hg38
Position
chr2:68,467,585-68,580,162
Strand
+
CDS length
1,536
Amino acid length
512
Gene symbol
APLF
Gene type
protein-coding
Gene description
aprataxin and PNKP like factor
Gene Entrez Gene ID
200558
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 68,467,585 68,467,827
2 68,490,190 68,490,261
3 68,502,731 68,502,903
4 68,513,080 68,513,227
5 68,513,548 68,513,680
6 68,526,061 68,526,242
7 68,537,872 68,538,227
8 68,545,187 68,545,312
9 68,567,341 68,567,387
10 68,577,820 68,580,162
CDS
Exon number Type Start Stop
1 CDS 68,467,732 68,467,827
2 CDS 68,490,190 68,490,261
3 CDS 68,502,731 68,502,903
4 CDS 68,513,080 68,513,227
5 CDS 68,513,548 68,513,680
6 CDS 68,526,061 68,526,242
7 CDS 68,537,872 68,538,227
8 CDS 68,545,187 68,545,312
9 CDS 68,567,341 68,567,387
10 CDS 68,577,820 68,578,022
Other genome
Genome Chromosome Start End Links
hg19 chr2 68,694,717 68,807,294 Link
CDS sequence
ATGTCCGGGGGCTTCGAGCTGCAGCCGCGGGACGGCGGTCCCCGGGTGGCCCTGGCGCCCGGGGAGACGGTGATCGGCCGCGGGCCGCTGCTGGGAATAACAGACAAGAGAGTATCCAGAAGACATGCCATTCTTGAGGTGGCAGGTGGTCAGCTGCGAATCAAACCGATACACACAAATCCATGTTTTTACCAGTCTTCAGAGAAGAGTCAGCTCTTACCATTGAAGCCAAATCTATGGTGCTATTTGAATCCTGGAGACAGCTTTTCTTTGTTAGTTGACAAATACATTTTCCGCATTCTCTCTATACCCTCTGAAGTGGAAATGCAATGTACCTTAAGAAACAGTCAAGTGCTTGATGAAGATAATATATTGAATGAAACACCAAAATCCCCCGTGATTAATTTACCTCATGAGACTACTGGTGCCTCACAACTGGAAGGAAGCACAGAAATAGCCAAGACCCAGATGACTCCCACAAATAGTGTGTCTTTCCTAGGTGAAAATAGAGACTGCAATAAGCAGCAGCCAATCCTTGCCGAGAGGAAAAGAATCCTTCCAACTTGGATGTTAGCAGAACATTTAAGTGATCAAAACCTTTCAGTACCAGCAATCAGTGGAGGTAATGTAATCCAGGGAAGTGGAAAAGAAGAAATCTGCAAAGATAAATCCCAGCTAAACACAACCCAGCAAGGAAGAAGGCAATTAATTTCATCAGGAAGTTCAGAAAATACATCAGCAGAACAAGACACAGGAGAAGAGTGCAAAAATACTGATCAGGAAGAGTCTACCATTTCATCCAAGGAAATGCCACAATCATTTTCTGCAATCACATTAAGTAACACAGAGATGAATAATATTAAGACTAATGCACAGAGAAACAAACTTCCAATAGAGGAACTTGGTAAAGTTTCTAAACATAAAATTGCCACTAAAAGAACACCACATAAAGAAGATGAGGCAATGAGCTGTTCTGAAAATTGTTCGAGTGCCCAGGGCGACTCACTTCAGGATGAGTCTCAAGGGTCTCATTCTGAGTCCAGCTCTAATCCCTCCAATCCTGAAACTTTGCATGCAAAGGCAACTGATTCAGTTCTACAAGGTTCTGAAGGAAACAAGGTCAAGAGGACATCCTGCATGTATGGGGCAAACTGCTATAGGAAGAATCCTGTTCATTTTCAACATTTTAGCCATCCTGGTGATAGTGATTATGGAGGTGTACAAATCGTGGGCCAAGATGAGACTGATGACCGGCCTGAATGTCCCTATGGACCATCCTGTTATAGGAAGAATCCCCAGCACAAGATAGAATATAGACATAATACGCTTCCAGTGAGAAATGTTTTAGATGAAGATAATGATAATGTTGGGCAACCCAATGAGTATGACCTGAACGACAGCTTTCTAGATGATGAGGAAGAAGACTATGAGCCAACAGATGAAGATTCTGACTGGGAACCAGGAAAGGAAGATGAAGAGAAGGAAGATGTGGAAGAGCTTTTGAAAGAAGCAAAAAGGTTTATGAAAAGAAAATAG
Amino sequence
MSGGFELQPRDGGPRVALAPGETVIGRGPLLGITDKRVSRRHAILEVAGGQLRIKPIHTNPCFYQSSEKSQLLPLKPNLWCYLNPGDSFSLLVDKYIFRILSIPSEVEMQCTLRNSQVLDEDNILNETPKSPVINLPHETTGASQLEGSTEIAKTQMTPTNSVSFLGENRDCNKQQPILAERKRILPTWMLAEHLSDQNLSVPAISGGNVIQGSGKEEICKDKSQLNTTQQGRRQLISSGSSENTSAEQDTGEECKNTDQEESTISSKEMPQSFSAITLSNTEMNNIKTNAQRNKLPIEELGKVSKHKIATKRTPHKEDEAMSCSENCSSAQGDSLQDESQGSHSESSSNPSNPETLHAKATDSVLQGSEGNKVKRTSCMYGANCYRKNPVHFQHFSHPGDSDYGGVQIVGQDETDDRPECPYGPSCYRKNPQHKIEYRHNTLPVRNVLDEDNDNVGQPNEYDLNDSFLDDEEEDYEPTDEDSDWEPGKEDEEKEDVEELLKEAKRFMKRK*