ENST00000420306.1 C2orf42

Information
Transcript ID
ENST00000420306.1
Genome
hg19
Position
chr2:70,377,030-70,409,127
Strand
-
CDS length
1,725
Amino acid length
575
Gene symbol
C2orf42
Gene type
protein-coding
Gene description
chromosome 2 open reading frame 42
Gene Entrez Gene ID
54980
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 70,377,030 70,377,696
7 70,387,757 70,387,919
6 70,392,224 70,392,324
5 70,392,660 70,392,767
4 70,396,689 70,396,793
3 70,402,805 70,402,909
2 70,406,664 70,406,774
1 70,408,295 70,409,127
CDS
Exon number Type Start Stop
8 CDS 70,377,488 70,377,696
7 CDS 70,387,757 70,387,919
6 CDS 70,392,224 70,392,324
5 CDS 70,392,660 70,392,767
4 CDS 70,396,689 70,396,793
3 CDS 70,402,805 70,402,909
2 CDS 70,406,664 70,406,774
1 CDS 70,408,295 70,409,117
Other genome
Genome Chromosome Start End Links
hg38 chr2 70,149,898 70,181,995 Link
CDS sequence
ATGGAACCAAATTCTCTGAGGACTAAAGTCCCAGCTTTCTTATCTGATTTGGGGAAGGCCACATTGAGGGGAATCAGAAAGTGTCCCCGATGTGGCACATACAATGGAACCCGGGGACTGAGCTGTAAGAACAAGACATGTGGAACCATATTCCGCTACGGTGCACGCAAGCAGCCTAGTGTTGAAGCTGTCAAAATCATTACAGGCTCTGATCTTCAGGTCTACTCAGTGCGGCAAAGAGACCGGGGCCCTGATTACCGATGCTTTGTGGAGCTCGGGGTTTCAGAGACAACAATCCAGACAGTGGATGGGACGATCATCACTCAGCTGAGCTCTGGACGGTGTTATGTCCCCTCATGCCTGAAAGCTGCCACTCAAGGCGTTGTGGAAAACCAGTGCCAGCACATCAAGCTGGCGGTGAACTGCCAGGCAGAGGCCACCCCTCTGACCCTGAAGAGCTCGGTCCTGAATGCAATGCAGGCCTCCCCGGAAACCAAACAGACCATCTGGCAGTTGGCCACGGAACCCACAGGTCCTCTGGTGCAGAGAATTACTAAAAACATCTTGGTGGTGAAATGCAAGGCAAGCCAGAAGCACAGTTTGGGGTATTTGCATACATCTTTTGTGCAGAAAGTCAGTGGCAAAAGCTTGCCTGAGCGCCGCTTCTTCTGCTCCTGTCAGACTCTGAAATCGCACAAGTCAAATGCCTCCAAGGATGAGACAGCCCAGAGATGCATTCATTTCTTTGCTTGCATCTGTGCCTTTGCCAGTGATGAGACACTGGCTCAGGAATTCTCAGACTTCCTAAATTTTGATTCCAGCGGTCTTAAAGAGATTATTGTACCCCAGTTAGGTTGCCATTCAGAATCAACAGTATCTGCTTGTGAGTCTACTGCCTCTAAGTCAAAGAAGAGGAGAAAGGATGAAGTATCTGGTGCACAGATGAACAGTTCACTACTGCCTCAAGATGCAGTGAGCAGTAATCTAAGGAAAAGTGGCCTGAAAAAGCCTGTGGTTGCTTCCTCGTTAAAAAGGCAGGCCTGTGGTCAGCTGTTAGATGAGGCACAAGTGACTTTATCCTTCCAAGACTGGCTGGCCAGTGTCACAGAACGCATCCATCAAACCATGCACTATCAGTTTGATGGCAAACCAGAACCATTGGTGTTCCACATTCCTCAGTCATTTTTTGATGCCCTGCAACAAAGAATATCTATAGGAAGTGCAAAAAAACGGCTCCCCAACTCCACCACAGCTTTTGTTCGGAAAGATGCCTTGCCACTGGGAACCTTTTCCAAGTATACTTGGCATATCACTAATATCCTGCAAGTTAAACAAATCTTAGATACCCCAGAGATGCCCTTGGAAATCACCCGTAGCTTTATCCAGAACCGAGATGGGACTTATGAGCTATTTAAATGCCCTAAAGTGGAAGTAGAAAGCATAGCAGAAACCTACGGTCGTATAGAAAAACAACCAGTGCTGCGACCCTTGGAACTAAAAACTTTTCTCAAAGTTGGCAACACTTCCCCAGATCAAAAGGAGCCAACACCTTTCATCATCGAGTGGATCCCAGATATCCTTCCCCAATCTAAGATTGGCGAGCTGCGGATCAAGTTTGAGTATGGCCACCACCGGAATGGGCATGTGGCGGAGTACCAAGACCAGCGGCCCCCCTTGGACCAGCCCTTGGAACTGGCCCCTCTGACCACTATTACTTTCCCTTAA
Amino sequence
MEPNSLRTKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKNKTCGTIFRYGARKQPSVEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETTIQTVDGTIITQLSSGRCYVPSCLKAATQGVVENQCQHIKLAVNCQAEATPLTLKSSVLNAMQASPETKQTIWQLATEPTGPLVQRITKNILVVKCKASQKHSLGYLHTSFVQKVSGKSLPERRFFCSCQTLKSHKSNASKDETAQRCIHFFACICAFASDETLAQEFSDFLNFDSSGLKEIIVPQLGCHSESTVSACESTASKSKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSGLKKPVVASSLKRQACGQLLDEAQVTLSFQDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKRLPNSTTAFVRKDALPLGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVESIAETYGRIEKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIEWIPDILPQSKIGELRIKFEYGHHRNGHVAEYQDQRPPLDQPLELAPLTTITFP*