ENST00000420306.1 C2orf42

Information
Transcript ID
ENST00000420306.1
Genome
hg38
Position
chr2:70,149,898-70,181,995
Strand
-
CDS length
1,725
Amino acid length
575
Gene symbol
C2orf42
Gene type
protein-coding
Gene description
chromosome 2 open reading frame 42
Gene Entrez Gene ID
54980
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
8 70,149,898 70,150,564
7 70,160,625 70,160,787
6 70,165,092 70,165,192
5 70,165,528 70,165,635
4 70,169,557 70,169,661
3 70,175,673 70,175,777
2 70,179,532 70,179,642
1 70,181,163 70,181,995
CDS
Exon number Type Start Stop
8 CDS 70,150,356 70,150,564
7 CDS 70,160,625 70,160,787
6 CDS 70,165,092 70,165,192
5 CDS 70,165,528 70,165,635
4 CDS 70,169,557 70,169,661
3 CDS 70,175,673 70,175,777
2 CDS 70,179,532 70,179,642
1 CDS 70,181,163 70,181,985
Other genome
Genome Chromosome Start End Links
hg19 chr2 70,377,030 70,409,127 Link
CDS sequence
ATGGAACCAAATTCTCTGAGGACTAAAGTCCCAGCTTTCTTATCTGATTTGGGGAAGGCCACATTGAGGGGAATCAGAAAGTGTCCCCGATGTGGCACATACAATGGAACCCGGGGACTGAGCTGTAAGAACAAGACATGTGGAACCATATTCCGCTACGGTGCACGCAAGCAGCCTAGTGTTGAAGCTGTCAAAATCATTACAGGCTCTGATCTTCAGGTCTACTCAGTGCGGCAAAGAGACCGGGGCCCTGATTACCGATGCTTTGTGGAGCTCGGGGTTTCAGAGACAACAATCCAGACAGTGGATGGGACGATCATCACTCAGCTGAGCTCTGGACGGTGTTATGTCCCCTCATGCCTGAAAGCTGCCACTCAAGGCGTTGTGGAAAACCAGTGCCAGCACATCAAGCTGGCGGTGAACTGCCAGGCAGAGGCCACCCCTCTGACCCTGAAGAGCTCGGTCCTGAATGCAATGCAGGCCTCCCCGGAAACCAAACAGACCATCTGGCAGTTGGCCACGGAACCCACAGGTCCTCTGGTGCAGAGAATTACTAAAAACATCTTGGTGGTGAAATGCAAGGCAAGCCAGAAGCACAGTTTGGGGTATTTGCATACATCTTTTGTGCAGAAAGTCAGTGGCAAAAGCTTGCCTGAGCGCCGCTTCTTCTGCTCCTGTCAGACTCTGAAATCGCACAAGTCAAATGCCTCCAAGGATGAGACAGCCCAGAGATGCATTCATTTCTTTGCTTGCATCTGTGCCTTTGCCAGTGATGAGACACTGGCTCAGGAATTCTCAGACTTCCTAAATTTTGATTCCAGCGGTCTTAAAGAGATTATTGTACCCCAGTTAGGTTGCCATTCAGAATCAACAGTATCTGCTTGTGAGTCTACTGCCTCTAAGTCAAAGAAGAGGAGAAAGGATGAAGTATCTGGTGCACAGATGAACAGTTCACTACTGCCTCAAGATGCAGTGAGCAGTAATCTAAGGAAAAGTGGCCTGAAAAAGCCTGTGGTTGCTTCCTCGTTAAAAAGGCAGGCCTGTGGTCAGCTGTTAGATGAGGCACAAGTGACTTTATCCTTCCAAGACTGGCTGGCCAGTGTCACAGAACGCATCCATCAAACCATGCACTATCAGTTTGATGGCAAACCAGAACCATTGGTGTTCCACATTCCTCAGTCATTTTTTGATGCCCTGCAACAAAGAATATCTATAGGAAGTGCAAAAAAACGGCTCCCCAACTCCACCACAGCTTTTGTTCGGAAAGATGCCTTGCCACTGGGAACCTTTTCCAAGTATACTTGGCATATCACTAATATCCTGCAAGTTAAACAAATCTTAGATACCCCAGAGATGCCCTTGGAAATCACCCGTAGCTTTATCCAGAACCGAGATGGGACTTATGAGCTATTTAAATGCCCTAAAGTGGAAGTAGAAAGCATAGCAGAAACCTACGGTCGTATAGAAAAACAACCAGTGCTGCGACCCTTGGAACTAAAAACTTTTCTCAAAGTTGGCAACACTTCCCCAGATCAAAAGGAGCCAACACCTTTCATCATCGAGTGGATCCCAGATATCCTTCCCCAATCTAAGATTGGCGAGCTGCGGATCAAGTTTGAGTATGGCCACCACCGGAATGGGCATGTGGCGGAGTACCAAGACCAGCGGCCCCCCTTGGACCAGCCCTTGGAACTGGCCCCTCTGACCACTATTACTTTCCCTTAA
Amino sequence
MEPNSLRTKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKNKTCGTIFRYGARKQPSVEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETTIQTVDGTIITQLSSGRCYVPSCLKAATQGVVENQCQHIKLAVNCQAEATPLTLKSSVLNAMQASPETKQTIWQLATEPTGPLVQRITKNILVVKCKASQKHSLGYLHTSFVQKVSGKSLPERRFFCSCQTLKSHKSNASKDETAQRCIHFFACICAFASDETLAQEFSDFLNFDSSGLKEIIVPQLGCHSESTVSACESTASKSKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSGLKKPVVASSLKRQACGQLLDEAQVTLSFQDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKRLPNSTTAFVRKDALPLGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVESIAETYGRIEKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIEWIPDILPQSKIGELRIKFEYGHHRNGHVAEYQDQRPPLDQPLELAPLTTITFP*