ENST00000490605.3 FAM178B
Information
- Transcript ID
- ENST00000490605.3
- Genome
- hg19
- Position
- chr2:97,541,622-97,652,317
- Strand
- -
- CDS length
- 2,040
- Amino acid length
- 680
- Gene symbol
- FAM178B
- Gene type
- protein-coding
- Gene description
- family with sequence similarity 178 member B
- Gene Entrez Gene ID
- 51252
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 17 | 97,541,622 | 97,542,045 |
| 16 | 97,543,627 | 97,543,779 |
| 15 | 97,544,153 | 97,544,230 |
| 14 | 97,559,663 | 97,559,788 |
| 13 | 97,568,357 | 97,568,444 |
| 12 | 97,586,902 | 97,586,999 |
| 11 | 97,587,215 | 97,587,391 |
| 10 | 97,589,227 | 97,589,320 |
| 9 | 97,594,943 | 97,595,057 |
| 8 | 97,613,555 | 97,613,639 |
| 7 | 97,617,116 | 97,617,221 |
| 6 | 97,626,025 | 97,626,177 |
| 5 | 97,633,257 | 97,633,364 |
| 4 | 97,636,453 | 97,636,514 |
| 3 | 97,637,638 | 97,638,059 |
| 2 | 97,638,275 | 97,638,343 |
| 1 | 97,651,978 | 97,652,317 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 17 | CDS | 97,542,013 | 97,542,045 |
| 16 | CDS | 97,543,627 | 97,543,779 |
| 15 | CDS | 97,544,153 | 97,544,230 |
| 14 | CDS | 97,559,663 | 97,559,788 |
| 13 | CDS | 97,568,357 | 97,568,444 |
| 12 | CDS | 97,586,902 | 97,586,999 |
| 11 | CDS | 97,587,215 | 97,587,391 |
| 10 | CDS | 97,589,227 | 97,589,320 |
| 9 | CDS | 97,594,943 | 97,595,057 |
| 8 | CDS | 97,613,555 | 97,613,639 |
| 7 | CDS | 97,617,116 | 97,617,221 |
| 6 | CDS | 97,626,025 | 97,626,177 |
| 5 | CDS | 97,633,257 | 97,633,364 |
| 4 | CDS | 97,636,453 | 97,636,514 |
| 3 | CDS | 97,637,638 | 97,638,059 |
| 2 | CDS | 97,638,275 | 97,638,343 |
| 1 | CDS | 97,651,978 | 97,652,050 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr2 | 96,875,885 | 96,986,580 | Link |
CDS sequence
ATGTGGCCAAGGCTTCCAGGTGCGGGCCTCGCTCCACAACTCAGGAGGCAGGATCAGCGGCTCCATTTTACAGGACAGATGTCCCACGGCTTGCAGATGGCTGGGCCCCAGGAGACGGTGCTAGCCCTTCCTCTGAGAGAAGGGGTGCAGGCTGCCGCCACCGTGCCCATCCTCCTGTACAACCTGGAGGATGGCTTGTCAGACCATCCCCTGGACCAGGGGCCCCGCTGCCCTGCCCGGCGGCCCTGCAGCCCTGCCTCGGCTCCAGCTCCCACATCGCCAAAGAAGCCCAAGATACAGGCACCTGGGGAAACGTTTCCCACTGACTGGAGCCCCCCGCCCGTGGAATTCCTCAACCCGAGGGTGCTGCAGGCCAGTCGGGAGGCCCCGGCCCAGAGGTGGGTGGGTGTGGTGGGCCCCCAGGGCCTGAGGAGACTGGCTGGTGAGCTGCCCGAGGAGTTGGAGCAGGAACACCTGGACTTGGACCCGAAGAGGGGCCTGGCCTTGCCAGAGAAGCTGTTCTGGAACACGTCAGGCCTGAGCCAGCAGGCTGCGGCCCCAGAGTTTTCCTGGGGGGGCTCAGGAAGCTACTTCAACAACCTGGACTACTTACTGCAGGAGAAGAGGGAACAGGCCCTGGAGCAGGAGCGAGAGAGGCTGCTTCTGCAGGAGTGTCTCAATCTCAACTCCTTGGATCTTGATGAAGAGGAAGTGCCACTCACACCCGAGCACAGGATGCTGGTGGAAAAGTACTCAGTGTCCCTGCAGACCATCCCGCCGGTCCATCCAGGTGAGACTGTGTTTCTGCCCAGGTGTCACCCCCTGCCATGCATCCTGGACTCCTCACTCCTGAAGCCACGCAGCCACCTGGAAGGGCTGTTCCTCAGCTCCCCGCCAGCCCAACAGCTCTCCTTCCTGCGCAGTGGCCTCCTGAACATCCTCTACCTGCACATGCCTGACTGCCCGGTATCCCTGCTCCAGTGGCTGTTCCAGCTGCTGACATGGCCTCCAGAAACATCTTTGGGAGCCTTTGGTCTTCTGTGGGATCTCATTGTGGATGGAATCTTCCTTCAGCCTGATGAAGACAAGCACCTGTGGTGCCCCTCACTGCAAGAAGTCAGGGAGGCATTCCACAGCCTGGGTGCCCACAGTCCTGCCCTGTACCCTCTGGGGCCCTTTTGGCACGGTGGCAGGGTGCTTCCAGGCGAGGCTGGCCTGAATGAGAATGAGGAGCAGGACGCTCCCCAAGAGATTGCCTTGGACATCAGCCTGGGCCACATCTACAAGTTTCTGGCGCTGTGTGCCCAGGCCCAGCCGGGGGCCTACACTGATGAGAACCTCATGGGACTGATTGAGCTGCTGTGCCGCACCAGCCTGGACGTGGGGCTCCGCCTGCTGCCCAAAGTTGACCTCCAGCAGCTTCTCCTCTTGCTCCTGGAGAACATCCGGGAGTGGCCAGGGAAGCTCCAGGAACTGTGCTGCACCCTGAGCTGGGTGTCTGACCACCACCACAACCTGCTGGCCCTCGTGCAGTTCTTCCCAGACATGACCTCCCGGAGCAGGCGGCTTCGAAGCCAGCTCAGCCTTGTGGTCATTGCTCGAATGCTGGGCCAGCAGGAGATGCTCCCTCTCTGGCAAGAGAAGACCCAGCTGTCCTCGCTCAGCCGGCTCCTGGGCCTCATGAGGCCATCATCTCTCAGGCAATACCTGGACTCTGTGCCCTTGCCACCCTGCCAGGAGCAACAGCCAAAGGCTAGTGCCGAGCTAGACCACAAGGCCTGCTACCTGTGCCACAGCTTGCTGATGCTGGCCGGGGTAGTTGTTAGCTGCCAGGACATCACTCCAGACCAGTGGGGCGAGCTGCAGCTGCTGTGCATGCAGTTGGACCGCCACATCAGCACGCAGATCCGGGAGAGCCCCCAGGCCATGCACCGCACCATGCTCAAGGACCTGGCTACCCAGACCTACATCCGTTGGCAGGAGCTGCTGACCCACTGCCAGCCCCAGGCCCAGTATTTCAGCCCCTGGAAAGACATCTAA
Amino sequence
MWPRLPGAGLAPQLRRQDQRLHFTGQMSHGLQMAGPQETVLALPLREGVQAAATVPILLYNLEDGLSDHPLDQGPRCPARRPCSPASAPAPTSPKKPKIQAPGETFPTDWSPPPVEFLNPRVLQASREAPAQRWVGVVGPQGLRRLAGELPEELEQEHLDLDPKRGLALPEKLFWNTSGLSQQAAAPEFSWGGSGSYFNNLDYLLQEKREQALEQERERLLLQECLNLNSLDLDEEEVPLTPEHRMLVEKYSVSLQTIPPVHPGETVFLPRCHPLPCILDSSLLKPRSHLEGLFLSSPPAQQLSFLRSGLLNILYLHMPDCPVSLLQWLFQLLTWPPETSLGAFGLLWDLIVDGIFLQPDEDKHLWCPSLQEVREAFHSLGAHSPALYPLGPFWHGGRVLPGEAGLNENEEQDAPQEIALDISLGHIYKFLALCAQAQPGAYTDENLMGLIELLCRTSLDVGLRLLPKVDLQQLLLLLLENIREWPGKLQELCCTLSWVSDHHHNLLALVQFFPDMTSRSRRLRSQLSLVVIARMLGQQEMLPLWQEKTQLSSLSRLLGLMRPSSLRQYLDSVPLPPCQEQQPKASAELDHKACYLCHSLLMLAGVVVSCQDITPDQWGELQLLCMQLDRHISTQIRESPQAMHRTMLKDLATQTYIRWQELLTHCQPQAQYFSPWKDI*