ENST00000490605.3 FAM178B
Information
- Transcript ID
- ENST00000490605.3
- Genome
- hg38
- Position
- chr2:96,875,885-96,986,580
- Strand
- -
- CDS length
- 2,040
- Amino acid length
- 680
- Gene symbol
- FAM178B
- Gene type
- protein-coding
- Gene description
- family with sequence similarity 178 member B
- Gene Entrez Gene ID
- 51252
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 17 | 96,875,885 | 96,876,308 |
| 16 | 96,877,890 | 96,878,042 |
| 15 | 96,878,416 | 96,878,493 |
| 14 | 96,893,926 | 96,894,051 |
| 13 | 96,902,620 | 96,902,707 |
| 12 | 96,921,165 | 96,921,262 |
| 11 | 96,921,478 | 96,921,654 |
| 10 | 96,923,490 | 96,923,583 |
| 9 | 96,929,206 | 96,929,320 |
| 8 | 96,947,818 | 96,947,902 |
| 7 | 96,951,379 | 96,951,484 |
| 6 | 96,960,288 | 96,960,440 |
| 5 | 96,967,520 | 96,967,627 |
| 4 | 96,970,716 | 96,970,777 |
| 3 | 96,971,901 | 96,972,322 |
| 2 | 96,972,538 | 96,972,606 |
| 1 | 96,986,241 | 96,986,580 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 17 | CDS | 96,876,276 | 96,876,308 |
| 16 | CDS | 96,877,890 | 96,878,042 |
| 15 | CDS | 96,878,416 | 96,878,493 |
| 14 | CDS | 96,893,926 | 96,894,051 |
| 13 | CDS | 96,902,620 | 96,902,707 |
| 12 | CDS | 96,921,165 | 96,921,262 |
| 11 | CDS | 96,921,478 | 96,921,654 |
| 10 | CDS | 96,923,490 | 96,923,583 |
| 9 | CDS | 96,929,206 | 96,929,320 |
| 8 | CDS | 96,947,818 | 96,947,902 |
| 7 | CDS | 96,951,379 | 96,951,484 |
| 6 | CDS | 96,960,288 | 96,960,440 |
| 5 | CDS | 96,967,520 | 96,967,627 |
| 4 | CDS | 96,970,716 | 96,970,777 |
| 3 | CDS | 96,971,901 | 96,972,322 |
| 2 | CDS | 96,972,538 | 96,972,606 |
| 1 | CDS | 96,986,241 | 96,986,313 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr2 | 97,541,622 | 97,652,317 | Link |
CDS sequence
ATGTGGCCAAGGCTTCCAGGTGCGGGCCTCGCTCCACAACTCAGGAGGCAGGATCAGCGGCTCCATTTTACAGGACAGATGTCCCACGGCTTGCAGATGGCTGGGCCCCAGGAGACGGTGCTAGCCCTTCCTCTGAGAGAAGGGGTGCAGGCTGCCGCCACCGTGCCCATCCTCCTGTACAACCTGGAGGATGGCTTGTCAGACCATCCCCTGGACCAGGGGCCCCGCTGCCCTGCCCGGCGGCCCTGCAGCCCTGCCTCGGCTCCAGCTCCCACATCGCCAAAGAAGCCCAAGATACAGGCACCTGGGGAAACGTTTCCCACTGACTGGAGCCCCCCGCCCGTGGAATTCCTCAACCCGAGGGTGCTGCAGGCCAGTCGGGAGGCCCCGGCCCAGAGGTGGGTGGGTGTGGTGGGCCCCCAGGGCCTGAGGAGACTGGCTGGTGAGCTGCCCGAGGAGTTGGAGCAGGAACACCTGGACTTGGACCCGAAGAGGGGCCTGGCCTTGCCAGAGAAGCTGTTCTGGAACACGTCAGGCCTGAGCCAGCAGGCTGCGGCCCCAGAGTTTTCCTGGGGGGGCTCAGGAAGCTACTTCAACAACCTGGACTACTTACTGCAGGAGAAGAGGGAACAGGCCCTGGAGCAGGAGCGAGAGAGGCTGCTTCTGCAGGAGTGTCTCAATCTCAACTCCTTGGATCTTGATGAAGAGGAAGTGCCACTCACACCCGAGCACAGGATGCTGGTGGAAAAGTACTCAGTGTCCCTGCAGACCATCCCGCCGGTCCATCCAGGTGAGACTGTGTTTCTGCCCAGGTGTCACCCCCTGCCATGCATCCTGGACTCCTCACTCCTGAAGCCACGCAGCCACCTGGAAGGGCTGTTCCTCAGCTCCCCGCCAGCCCAACAGCTCTCCTTCCTGCGCAGTGGCCTCCTGAACATCCTCTACCTGCACATGCCTGACTGCCCGGTATCCCTGCTCCAGTGGCTGTTCCAGCTGCTGACATGGCCTCCAGAAACATCTTTGGGAGCCTTTGGTCTTCTGTGGGATCTCATTGTGGATGGAATCTTCCTTCAGCCTGATGAAGACAAGCACCTGTGGTGCCCCTCACTGCAAGAAGTCAGGGAGGCATTCCACAGCCTGGGTGCCCACAGTCCTGCCCTGTACCCTCTGGGGCCCTTTTGGCACGGTGGCAGGGTGCTTCCAGGCGAGGCTGGCCTGAATGAGAATGAGGAGCAGGACGCTCCCCAAGAGATTGCCTTGGACATCAGCCTGGGCCACATCTACAAGTTTCTGGCGCTGTGTGCCCAGGCCCAGCCGGGGGCCTACACTGATGAGAACCTCATGGGACTGATTGAGCTGCTGTGCCGCACCAGCCTGGACGTGGGGCTCCGCCTGCTGCCCAAAGTTGACCTCCAGCAGCTTCTCCTCTTGCTCCTGGAGAACATCCGGGAGTGGCCAGGGAAGCTCCAGGAACTGTGCTGCACCCTGAGCTGGGTGTCTGACCACCACCACAACCTGCTGGCCCTCGTGCAGTTCTTCCCAGACATGACCTCCCGGAGCAGGCGGCTTCGAAGCCAGCTCAGCCTTGTGGTCATTGCTCGAATGCTGGGCCAGCAGGAGATGCTCCCTCTCTGGCAAGAGAAGACCCAGCTGTCCTCGCTCAGCCGGCTCCTGGGCCTCATGAGGCCATCATCTCTCAGGCAATACCTGGACTCTGTGCCCTTGCCACCCTGCCAGGAGCAACAGCCAAAGGCTAGTGCCGAGCTAGACCACAAGGCCTGCTACCTGTGCCACAGCTTGCTGATGCTGGCCGGGGTAGTTGTTAGCTGCCAGGACATCACTCCAGACCAGTGGGGCGAGCTGCAGCTGCTGTGCATGCAGTTGGACCGCCACATCAGCACGCAGATCCGGGAGAGCCCCCAGGCCATGCACCGCACCATGCTCAAGGACCTGGCTACCCAGACCTACATCCGTTGGCAGGAGCTGCTGACCCACTGCCAGCCCCAGGCCCAGTATTTCAGCCCCTGGAAAGACATCTAA
Amino sequence
MWPRLPGAGLAPQLRRQDQRLHFTGQMSHGLQMAGPQETVLALPLREGVQAAATVPILLYNLEDGLSDHPLDQGPRCPARRPCSPASAPAPTSPKKPKIQAPGETFPTDWSPPPVEFLNPRVLQASREAPAQRWVGVVGPQGLRRLAGELPEELEQEHLDLDPKRGLALPEKLFWNTSGLSQQAAAPEFSWGGSGSYFNNLDYLLQEKREQALEQERERLLLQECLNLNSLDLDEEEVPLTPEHRMLVEKYSVSLQTIPPVHPGETVFLPRCHPLPCILDSSLLKPRSHLEGLFLSSPPAQQLSFLRSGLLNILYLHMPDCPVSLLQWLFQLLTWPPETSLGAFGLLWDLIVDGIFLQPDEDKHLWCPSLQEVREAFHSLGAHSPALYPLGPFWHGGRVLPGEAGLNENEEQDAPQEIALDISLGHIYKFLALCAQAQPGAYTDENLMGLIELLCRTSLDVGLRLLPKVDLQQLLLLLLENIREWPGKLQELCCTLSWVSDHHHNLLALVQFFPDMTSRSRRLRSQLSLVVIARMLGQQEMLPLWQEKTQLSSLSRLLGLMRPSSLRQYLDSVPLPPCQEQQPKASAELDHKACYLCHSLLMLAGVVVSCQDITPDQWGELQLLCMQLDRHISTQIRESPQAMHRTMLKDLATQTYIRWQELLTHCQPQAQYFSPWKDI*