ENST00000371688.8 LCN8
Information
- Transcript ID
- ENST00000371688.8
- Genome
- hg38
- Position
- chr9:136,754,386-136,758,243
- Strand
- -
- CDS length
- 459
- Amino acid length
- 153
- Gene symbol
- LCN8
- Gene type
- protein-coding
- Gene description
- lipocalin 8
- Gene Entrez Gene ID
- 138307
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 136,754,386 | 136,754,509 |
| 6 | 136,755,135 | 136,755,160 |
| 5 | 136,755,244 | 136,755,333 |
| 4 | 136,755,412 | 136,755,516 |
| 3 | 136,756,522 | 136,756,592 |
| 2 | 136,757,038 | 136,757,168 |
| 1 | 136,757,907 | 136,758,243 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 136,754,498 | 136,754,509 |
| 6 | CDS | 136,755,135 | 136,755,160 |
| 5 | CDS | 136,755,244 | 136,755,333 |
| 4 | CDS | 136,755,412 | 136,755,516 |
| 3 | CDS | 136,756,522 | 136,756,592 |
| 2 | CDS | 136,757,038 | 136,757,168 |
| 1 | CDS | 136,757,907 | 136,757,930 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr9 | 139,648,838 | 139,652,695 | Link |
CDS sequence
ATGGAGGAGCTGGACCGGCAGAAGATTGGAGGATTCTGGAGGGAAGTCGGTGTGGCCTCCGATCAAAGCCTGGTGCTGACGGCCCCGAAGCGGGTGGAGGGCTTGTTCCTCACCTTGAGCGGGAGTAACCTGACCGTGAAGGTTGCATATAACAGCTCAGGAAGCTGTGAGATAGAGAAGATCGTGGGCTCAGAAATAGACAGTACGGGAAAATTCGCTTTTCCTGGCCACAGAGAGATCCACGTGCTGGACACCGACTACGAGGGCTACGCCATCCTGCGGGTGTCCCTGATGTGGCGGGGCAGGAACTTTCGCGTCCTCAAGTACTTTACTCGGAGCCTTGAGGACAAGGACCGGCTGGGGTTCTGGAAGTTTCGGGAGCTGACAGCAGACACTGGTCTCTACCTGGCGGCCCGGCCTGGGCGGTGTGCCGAGCTCCTGAAGGAGGAGCTGATTTAA
Amino sequence
MEELDRQKIGGFWREVGVASDQSLVLTAPKRVEGLFLTLSGSNLTVKVAYNSSGSCEIEKIVGSEIDSTGKFAFPGHREIHVLDTDYEGYAILRVSLMWRGRNFRVLKYFTRSLEDKDRLGFWKFRELTADTGLYLAARPGRCAELLKEELI*