ENST00000371688.8 LCN8

Information
Transcript ID
ENST00000371688.8
Genome
hg19
Position
chr9:139,648,838-139,652,695
Strand
-
CDS length
459
Amino acid length
153
Gene symbol
LCN8
Gene type
protein-coding
Gene description
lipocalin 8
Gene Entrez Gene ID
138307
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
7 139,648,838 139,648,961
6 139,649,587 139,649,612
5 139,649,696 139,649,785
4 139,649,864 139,649,968
3 139,650,974 139,651,044
2 139,651,490 139,651,620
1 139,652,359 139,652,695
CDS
Exon number Type Start Stop
7 CDS 139,648,950 139,648,961
6 CDS 139,649,587 139,649,612
5 CDS 139,649,696 139,649,785
4 CDS 139,649,864 139,649,968
3 CDS 139,650,974 139,651,044
2 CDS 139,651,490 139,651,620
1 CDS 139,652,359 139,652,382
Other genome
Genome Chromosome Start End Links
hg38 chr9 136,754,386 136,758,243 Link
CDS sequence
ATGGAGGAGCTGGACCGGCAGAAGATTGGAGGATTCTGGAGGGAAGTCGGTGTGGCCTCCGATCAAAGCCTGGTGCTGACGGCCCCGAAGCGGGTGGAGGGCTTGTTCCTCACCTTGAGCGGGAGTAACCTGACCGTGAAGGTTGCATATAACAGCTCAGGAAGCTGTGAGATAGAGAAGATCGTGGGCTCAGAAATAGACAGTACGGGAAAATTCGCTTTTCCTGGCCACAGAGAGATCCACGTGCTGGACACCGACTACGAGGGCTACGCCATCCTGCGGGTGTCCCTGATGTGGCGGGGCAGGAACTTTCGCGTCCTCAAGTACTTTACTCGGAGCCTTGAGGACAAGGACCGGCTGGGGTTCTGGAAGTTTCGGGAGCTGACAGCAGACACTGGTCTCTACCTGGCGGCCCGGCCTGGGCGGTGTGCCGAGCTCCTGAAGGAGGAGCTGATTTAA
Amino sequence
MEELDRQKIGGFWREVGVASDQSLVLTAPKRVEGLFLTLSGSNLTVKVAYNSSGSCEIEKIVGSEIDSTGKFAFPGHREIHVLDTDYEGYAILRVSLMWRGRNFRVLKYFTRSLEDKDRLGFWKFRELTADTGLYLAARPGRCAELLKEELI*