ENST00000409673.7 SCRN3
Information
- Transcript ID
- ENST00000409673.7
- Genome
- hg19
- Position
- chr2:175,260,473-175,293,145
- Strand
- +
- CDS length
- 1,254
- Amino acid length
- 418
- Gene symbol
- SCRN3
- Gene type
- protein-coding
- Gene description
- secernin 3
- Gene Entrez Gene ID
- 79634
Variants
Display target variant
Search Word
Target data | : |
MGeND data only
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Category | : |
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Search word | : | |
Filtering | : |
Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation | Entry | Origin | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Search Word
Target data | : |
MGeND data only
|
Category | : |
|
Search word | : | |
Filtering | : |
Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Entry | Origin | Type | Annotation |
Exon
Exon number | Start | Stop |
---|---|---|
1 | 175,260,473 | 175,260,545 |
2 | 175,263,094 | 175,263,170 |
3 | 175,264,650 | 175,264,831 |
4 | 175,265,718 | 175,265,917 |
5 | 175,268,831 | 175,269,043 |
6 | 175,287,613 | 175,287,775 |
7 | 175,289,203 | 175,289,377 |
8 | 175,292,441 | 175,293,145 |
CDS
Exon number | Type | Start | Stop |
---|---|---|---|
1 | CDS | 175,260,485 | 175,260,545 |
2 | CDS | 175,263,094 | 175,263,170 |
3 | CDS | 175,264,650 | 175,264,831 |
4 | CDS | 175,265,718 | 175,265,917 |
5 | CDS | 175,268,831 | 175,269,043 |
6 | CDS | 175,287,613 | 175,287,775 |
7 | CDS | 175,289,203 | 175,289,377 |
8 | CDS | 175,292,441 | 175,292,623 |
Other genome
Genome | Chromosome | Start | End | Links |
---|---|---|---|---|
hg38 | chr2 | 174,395,745 | 174,428,417 | Link |
CDS sequence
ATGCCTCCACTGGCCACTCCTCCCTCCGTCCACCTGTCACTTCGGGTAGCTGGGAGGCCAGATAGACTCTATGATGAAGTACAAGAGGTGGTTTATTTTCCTGCTGTAGTTCATGATAACCTGGGAGAACGTCTTAAGTGTACATATATAGAAATTGATCAAGTTCCTGAAACATATGCTGTTGTCCTGAGTCGCCCAGCGTGGTTGTGGGGGGCAGAAATGGGAGCCAATGAGCATGGAGTTTGCATTGGGAATGAAGCTGTATGGGGAAGAGAAGAAGTTTGTGATGAAGAAGCACTATTAGGAATGGACCTTGTCAGACTTGGCCTTGAAAGAGCTGATACAGCTGAAAAAGCCCTCAATGTCATTGTTGACTTACTAGAAAAATATGGCCAGGGTGGAAATTGCACAGAGGGTAGAATGGTATTTAGCTATCACAACAGTTTCCTGATAGCTGATAGGAATGAAGCCTGGATTCTGGAGACTGCAGGGAAGTACTGGGCAGCAGAAAAAGTACAAGAGGGAGTTCGTAATATTTCTAATCAACTTTCCATAACAACCAAGATTGCCCGGGAACACCCAGACATGAGAAACTATGCTAAGCGGAAAGGTTGGTGGGATGGTAAAAAGGAGTTTGATTTTGCTGCAGCATATTCCTATCTTGACACAGCCAAGATGATGACTTCATCAGGCAGATACTGTGAGGGCTACAAGCTTCTAAATAAGCACAAAGGAAATATAACTTTTGAAACAATGATGGAAATTCTTCGAGATAAACCAAGTGGCATTAATATGGAGGGAGAATTCCTGACCACTGCAAGCATGGTTTCTATTTTACCTCAAGACTCCAGCCTTCCTTGCATTCACTTCTTTACAGGGACTCCTGATCCTGAGAGATCTGTTTTTAAGCCTTTCATATTTGTGCCACATATTTCACAACTATTGGATACCAGTTCACCAACATTTGAACTTGAAGATCTAGTTAAAAAGAAATCACATTTTAAGCCTGACAGAAGACACCCACTCTACCAAAAACATCAACAGGCATTGGAAGTAGTAAATAATAATGAGGAAAAAGCCAAAATAATGTTGGACAACATGAGGAAACTGGAGAAAGAACTATTCAGAGAGATGGAATCAATCCTTCAAAACAAGCATCTTGATGTGGAGAAAATTGTTAATCTCTTTCCTCAGTGTACAAAAGATGAAATTCAAATTTATCAGTCAAATTTATCAGTCAAAGTTAGTTCTTAG
Amino sequence
MPPLATPPSVHLSLRVAGRPDRLYDEVQEVVYFPAVVHDNLGERLKCTYIEIDQVPETYAVVLSRPAWLWGAEMGANEHGVCIGNEAVWGREEVCDEEALLGMDLVRLGLERADTAEKALNVIVDLLEKYGQGGNCTEGRMVFSYHNSFLIADRNEAWILETAGKYWAAEKVQEGVRNISNQLSITTKIAREHPDMRNYAKRKGWWDGKKEFDFAAAYSYLDTAKMMTSSGRYCEGYKLLNKHKGNITFETMMEILRDKPSGINMEGEFLTTASMVSILPQDSSLPCIHFFTGTPDPERSVFKPFIFVPHISQLLDTSSPTFELEDLVKKKSHFKPDRRHPLYQKHQQALEVVNNNEEKAKIMLDNMRKLEKELFREMESILQNKHLDVEKIVNLFPQCTKDEIQIYQSNLSVKVSS*