ENST00000409475.5 PGAP1
Information
- Transcript ID
- ENST00000409475.5
- Genome
- hg19
- Position
- chr2:197,712,200-197,791,454
- Strand
- -
- CDS length
- 1,779
- Amino acid length
- 593
- Gene symbol
- PGAP1
- Gene type
- protein-coding
- Gene description
- post-GPI attachment to proteins inositol deacylase 1
- Gene Entrez Gene ID
- 80055
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 20 | 197,712,200 | 197,712,761 |
| 19 | 197,735,665 | 197,735,703 |
| 18 | 197,737,165 | 197,737,273 |
| 17 | 197,737,684 | 197,737,750 |
| 16 | 197,738,252 | 197,738,303 |
| 15 | 197,738,409 | 197,738,482 |
| 14 | 197,740,470 | 197,740,545 |
| 13 | 197,744,800 | 197,744,877 |
| 12 | 197,750,148 | 197,750,199 |
| 11 | 197,750,558 | 197,750,604 |
| 10 | 197,755,552 | 197,755,635 |
| 9 | 197,757,070 | 197,757,125 |
| 8 | 197,757,864 | 197,757,969 |
| 7 | 197,761,855 | 197,761,921 |
| 6 | 197,763,041 | 197,763,093 |
| 5 | 197,767,309 | 197,767,466 |
| 4 | 197,777,606 | 197,777,777 |
| 3 | 197,781,142 | 197,781,317 |
| 2 | 197,784,721 | 197,784,874 |
| 1 | 197,791,194 | 197,791,454 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 20 | CDS | 197,712,750 | 197,712,761 |
| 19 | CDS | 197,735,665 | 197,735,703 |
| 18 | CDS | 197,737,165 | 197,737,273 |
| 17 | CDS | 197,737,684 | 197,737,750 |
| 16 | CDS | 197,738,252 | 197,738,303 |
| 15 | CDS | 197,738,409 | 197,738,482 |
| 14 | CDS | 197,740,470 | 197,740,545 |
| 13 | CDS | 197,744,800 | 197,744,877 |
| 12 | CDS | 197,750,148 | 197,750,199 |
| 11 | CDS | 197,750,558 | 197,750,604 |
| 10 | CDS | 197,755,552 | 197,755,635 |
| 9 | CDS | 197,757,070 | 197,757,125 |
| 8 | CDS | 197,757,864 | 197,757,969 |
| 7 | CDS | 197,761,855 | 197,761,921 |
| 6 | CDS | 197,763,041 | 197,763,093 |
| 5 | CDS | 197,767,309 | 197,767,466 |
| 4 | CDS | 197,777,606 | 197,777,777 |
| 3 | CDS | 197,781,142 | 197,781,317 |
| 2 | CDS | 197,784,721 | 197,784,874 |
| 1 | CDS | 197,791,194 | 197,791,340 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr2 | 196,847,476 | 196,926,730 | Link |
CDS sequence
ATGTTTCTTCACTCAGTTAATCTCTGGAACCTGGCGTTTTATGTCTTCATGGTCTTTCTGGCAACCCTGGGGCTGTGGGATGTCTTCTTCGGCTTCGAGGAGAATAAGTGCAGTATGAGCTACATGTTTGAGTACCCGGAGTATCAGAAAATAGAACTTCCAAAGAAACTGGCAAAACGCTATCCCGCATATGAGTTGTATCTTTATGGAGAGGGATCCTATGCTGAAGAACACAAAATTCTCCCTTTGACGGGTATTCCAGTTCTCTTTCTTCCTGGTAATGCTGGAAGTTATAAGCAAGTTCGTTCTATTGGCTCCATTGCACTTAGAAAAGCAGAGGACATTGACTTCAAGTACCACTTTGACTTCTTTAGTGTGAACTTCAATGAAGAACTGGTGGCTTTGTATGGTGGAAGTCTTCAGAAGCAGACCAAGTTTGTACATGAATGTATTAAAACAATTCTCAAACTCTATAAGGGTCAAGAATTTGCTCCAAAAAGTGTGGCAATAATTGGTCATTCTATGGGTGGCCTTGTTGCAAGAGCATTGCTTACACTGAAAAATTTTAAGCATGATCTGATAAATCTTCTTATTACACAAGCCACACCTCATGTTGCTCCTGTGATGCCATTAGATCGTTTCATTACAGATTTTTATACGACTGTAAACAACTATTGGATTCTAAATGCTCGACACATAAATTTAACCACACTTTCTGTAGCTGGAGGATTCCGGGATTACCAAGTTCGTTCAGGATTGACTTTTCTACCAAAATTAAGCCATCATACCAGTGCCTTATCTGTTGTGAGTTCAGCAGTGCCTAAGACCTGGGTCTCAACAGACCACCTCTCCATTGTGTGGTGTAAACAATTGCAGTTGACTACAGTTCGAGCATTCTTTGATCTTATTGATGCTGATACTAAACAAATAACTCAAAATTCCAAGAAGAAACTGTCAGTTTTGTATCACCACTTTATAAGACACCCATCAAAACATTTTGAGGAAAATCCAGCTATAATTTCTGACTTAACAGGGACATCTATGTGGGTTCTAGTAAAAGTGTCCAAATGGACCTATGTAGCTTACAACGAATCTGAGAAGATATATTTTACATTTCCTCTTGAAAATCATAGAAAAATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGCACTTCTATGTGCCTGCAAGGGGTTGATTTATCATGGAAAGCTGAACTGCTGCCAACAATTAAGTATCTGACATTAAGACTTCAAGACTATCCATCTTTGTCTCATCTTGTTGTTTATGTACCATCTGTTCGTGGAAGTAAGTTTGTTGTAGATTGTGAATTCTTTAAAAAAGAGAAAAGATACATACAGCTTCCTGTAACTCATCTTTTTTCCTTTGGATTGTCTTCAAGGAAAGTGGTGTTAAATACAAATGGCCTATACTACAATCTAGAGCTTCTGAACTTTGGACAGATATACCAAGCTTTTAAAATCAACGTGGTAAGCAAGTGCTCAGCAGTCAAAGAAGAAATAACCAGTATCTATAGACTTCATATTCCTTGGTCTTATGAAGATTCACTAACCATTGCACAGGCTCCATCTTCCACAGAAATTTCTCTGAAACTCCATATTGCTCAACCAGAAAACAATACCCATGTGGCATTATTTAAAATGTACACGTCATCAGACTGTCGGTACGAGGTGACAGTTAAGACTTCCTTTTCACAAATACTTGGACAGGTTGTTGCTTAG
Amino sequence
MFLHSVNLWNLAFYVFMVFLATLGLWDVFFGFEENKCSMSYMFEYPEYQKIELPKKLAKRYPAYELYLYGEGSYAEEHKILPLTGIPVLFLPGNAGSYKQVRSIGSIALRKAEDIDFKYHFDFFSVNFNEELVALYGGSLQKQTKFVHECIKTILKLYKGQEFAPKSVAIIGHSMGGLVARALLTLKNFKHDLINLLITQATPHVAPVMPLDRFITDFYTTVNNYWILNARHINLTTLSVAGGFRDYQVRSGLTFLPKLSHHTSALSVVSSAVPKTWVSTDHLSIVWCKQLQLTTVRAFFDLIDADTKQITQNSKKKLSVLYHHFIRHPSKHFEENPAIISDLTGTSMWVLVKVSKWTYVAYNESEKIYFTFPLENHRKIYTHVYCQSTMLDTNSWIFACINSTSMCLQGVDLSWKAELLPTIKYLTLRLQDYPSLSHLVVYVPSVRGSKFVVDCEFFKKEKRYIQLPVTHLFSFGLSSRKVVLNTNGLYYNLELLNFGQIYQAFKINVVSKCSAVKEEITSIYRLHIPWSYEDSLTIAQAPSSTEISLKLHIAQPENNTHVALFKMYTSSDCRYEVTVKTSFSQILGQVVA*