ENST00000409475.5 PGAP1

Information
Transcript ID
ENST00000409475.5
Genome
hg38
Position
chr2:196,847,476-196,926,730
Strand
-
CDS length
1,779
Amino acid length
593
Gene symbol
PGAP1
Gene type
protein-coding
Gene description
post-GPI attachment to proteins inositol deacylase 1
Gene Entrez Gene ID
80055
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
20 196,847,476 196,848,037
19 196,870,941 196,870,979
18 196,872,441 196,872,549
17 196,872,960 196,873,026
16 196,873,528 196,873,579
15 196,873,685 196,873,758
14 196,875,746 196,875,821
13 196,880,076 196,880,153
12 196,885,424 196,885,475
11 196,885,834 196,885,880
10 196,890,828 196,890,911
9 196,892,346 196,892,401
8 196,893,140 196,893,245
7 196,897,131 196,897,197
6 196,898,317 196,898,369
5 196,902,585 196,902,742
4 196,912,882 196,913,053
3 196,916,418 196,916,593
2 196,919,997 196,920,150
1 196,926,470 196,926,730
CDS
Exon number Type Start Stop
20 CDS 196,848,026 196,848,037
19 CDS 196,870,941 196,870,979
18 CDS 196,872,441 196,872,549
17 CDS 196,872,960 196,873,026
16 CDS 196,873,528 196,873,579
15 CDS 196,873,685 196,873,758
14 CDS 196,875,746 196,875,821
13 CDS 196,880,076 196,880,153
12 CDS 196,885,424 196,885,475
11 CDS 196,885,834 196,885,880
10 CDS 196,890,828 196,890,911
9 CDS 196,892,346 196,892,401
8 CDS 196,893,140 196,893,245
7 CDS 196,897,131 196,897,197
6 CDS 196,898,317 196,898,369
5 CDS 196,902,585 196,902,742
4 CDS 196,912,882 196,913,053
3 CDS 196,916,418 196,916,593
2 CDS 196,919,997 196,920,150
1 CDS 196,926,470 196,926,616
Other genome
Genome Chromosome Start End Links
hg19 chr2 197,712,200 197,791,454 Link
CDS sequence
ATGTTTCTTCACTCAGTTAATCTCTGGAACCTGGCGTTTTATGTCTTCATGGTCTTTCTGGCAACCCTGGGGCTGTGGGATGTCTTCTTCGGCTTCGAGGAGAATAAGTGCAGTATGAGCTACATGTTTGAGTACCCGGAGTATCAGAAAATAGAACTTCCAAAGAAACTGGCAAAACGCTATCCCGCATATGAGTTGTATCTTTATGGAGAGGGATCCTATGCTGAAGAACACAAAATTCTCCCTTTGACGGGTATTCCAGTTCTCTTTCTTCCTGGTAATGCTGGAAGTTATAAGCAAGTTCGTTCTATTGGCTCCATTGCACTTAGAAAAGCAGAGGACATTGACTTCAAGTACCACTTTGACTTCTTTAGTGTGAACTTCAATGAAGAACTGGTGGCTTTGTATGGTGGAAGTCTTCAGAAGCAGACCAAGTTTGTACATGAATGTATTAAAACAATTCTCAAACTCTATAAGGGTCAAGAATTTGCTCCAAAAAGTGTGGCAATAATTGGTCATTCTATGGGTGGCCTTGTTGCAAGAGCATTGCTTACACTGAAAAATTTTAAGCATGATCTGATAAATCTTCTTATTACACAAGCCACACCTCATGTTGCTCCTGTGATGCCATTAGATCGTTTCATTACAGATTTTTATACGACTGTAAACAACTATTGGATTCTAAATGCTCGACACATAAATTTAACCACACTTTCTGTAGCTGGAGGATTCCGGGATTACCAAGTTCGTTCAGGATTGACTTTTCTACCAAAATTAAGCCATCATACCAGTGCCTTATCTGTTGTGAGTTCAGCAGTGCCTAAGACCTGGGTCTCAACAGACCACCTCTCCATTGTGTGGTGTAAACAATTGCAGTTGACTACAGTTCGAGCATTCTTTGATCTTATTGATGCTGATACTAAACAAATAACTCAAAATTCCAAGAAGAAACTGTCAGTTTTGTATCACCACTTTATAAGACACCCATCAAAACATTTTGAGGAAAATCCAGCTATAATTTCTGACTTAACAGGGACATCTATGTGGGTTCTAGTAAAAGTGTCCAAATGGACCTATGTAGCTTACAACGAATCTGAGAAGATATATTTTACATTTCCTCTTGAAAATCATAGAAAAATCTACACTCATGTCTATTGTCAGAGCACTATGCTGGATACAAATAGTTGGATTTTTGCTTGCATAAACAGCACTTCTATGTGCCTGCAAGGGGTTGATTTATCATGGAAAGCTGAACTGCTGCCAACAATTAAGTATCTGACATTAAGACTTCAAGACTATCCATCTTTGTCTCATCTTGTTGTTTATGTACCATCTGTTCGTGGAAGTAAGTTTGTTGTAGATTGTGAATTCTTTAAAAAAGAGAAAAGATACATACAGCTTCCTGTAACTCATCTTTTTTCCTTTGGATTGTCTTCAAGGAAAGTGGTGTTAAATACAAATGGCCTATACTACAATCTAGAGCTTCTGAACTTTGGACAGATATACCAAGCTTTTAAAATCAACGTGGTAAGCAAGTGCTCAGCAGTCAAAGAAGAAATAACCAGTATCTATAGACTTCATATTCCTTGGTCTTATGAAGATTCACTAACCATTGCACAGGCTCCATCTTCCACAGAAATTTCTCTGAAACTCCATATTGCTCAACCAGAAAACAATACCCATGTGGCATTATTTAAAATGTACACGTCATCAGACTGTCGGTACGAGGTGACAGTTAAGACTTCCTTTTCACAAATACTTGGACAGGTTGTTGCTTAG
Amino sequence
MFLHSVNLWNLAFYVFMVFLATLGLWDVFFGFEENKCSMSYMFEYPEYQKIELPKKLAKRYPAYELYLYGEGSYAEEHKILPLTGIPVLFLPGNAGSYKQVRSIGSIALRKAEDIDFKYHFDFFSVNFNEELVALYGGSLQKQTKFVHECIKTILKLYKGQEFAPKSVAIIGHSMGGLVARALLTLKNFKHDLINLLITQATPHVAPVMPLDRFITDFYTTVNNYWILNARHINLTTLSVAGGFRDYQVRSGLTFLPKLSHHTSALSVVSSAVPKTWVSTDHLSIVWCKQLQLTTVRAFFDLIDADTKQITQNSKKKLSVLYHHFIRHPSKHFEENPAIISDLTGTSMWVLVKVSKWTYVAYNESEKIYFTFPLENHRKIYTHVYCQSTMLDTNSWIFACINSTSMCLQGVDLSWKAELLPTIKYLTLRLQDYPSLSHLVVYVPSVRGSKFVVDCEFFKKEKRYIQLPVTHLFSFGLSSRKVVLNTNGLYYNLELLNFGQIYQAFKINVVSKCSAVKEEITSIYRLHIPWSYEDSLTIAQAPSSTEISLKLHIAQPENNTHVALFKMYTSSDCRYEVTVKTSFSQILGQVVA*