ENST00000409334.5 COPS8
Information
- Transcript ID
- ENST00000409334.5
- Genome
- hg19
- Position
- chr2:237,994,527-238,006,576
- Strand
- +
- CDS length
- 522
- Amino acid length
- 174
- Gene symbol
- COPS8
- Gene type
- protein-coding
- Gene description
- COP9 signalosome subunit 8
- Gene Entrez Gene ID
- 10920
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 237,994,527 | 237,994,685 |
| 2 | 237,995,770 | 237,995,840 |
| 3 | 237,997,248 | 237,997,296 |
| 4 | 237,998,505 | 237,998,637 |
| 5 | 238,004,465 | 238,004,527 |
| 6 | 238,005,465 | 238,005,512 |
| 7 | 238,006,306 | 238,006,576 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 237,994,608 | 237,994,685 |
| 2 | CDS | 237,995,770 | 237,995,840 |
| 3 | CDS | 237,997,248 | 237,997,296 |
| 4 | CDS | 237,998,505 | 237,998,637 |
| 5 | CDS | 238,004,465 | 238,004,527 |
| 6 | CDS | 238,005,465 | 238,005,512 |
| 7 | CDS | 238,006,306 | 238,006,385 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr2 | 237,085,884 | 237,097,933 | Link |
CDS sequence
ATGCCAGTGGCGGTGATGGCGGAAAGCGCCTTTAGTTTCAAAAAGTTGCTGGATCAGTGCGAGAACCAGGAGCTCGAGGCCCCTGGAGGAATTGCTACACCCCCAGTGTATGGTCAGCTTCTAGCTTTATATTTGCTCCATAATGACATGAATAATGCAAGATATCTTTGGAAAAGAATACCACCTGCTATAAAATCTGCAAATTCTGAACTTGGGGGAATTTGGTCAGTAGGACAAAGAATCTGGCAGAGAGATTTCCCTGGGATCTATACAACCATCAACGCTCACCAGTGGTCTGAGACGGTCCAGCCAATTATGGAAGCACTTAGAGGCATATTAGAACAAGGATGGCAAGCTGATTCCACCACAAGAATGGTTCTGCCCAGAAAGCCAGTTGCAGGGGCCCTGGATGTTTCCTTTAACAAGTTTATTCCCTTATCAGAGCCTGCTCCAGTTCCCCCAATACCCAATGAACAGCAGTTAGCCAGACTGACGGATTATGTGGCTTTCCTTGAAAACTGA
Amino sequence
MPVAVMAESAFSFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRIPPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRGILEQGWQADSTTRMVLPRKPVAGALDVSFNKFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN*