ENST00000409334.5 COPS8
Information
- Transcript ID
- ENST00000409334.5
- Genome
- hg38
- Position
- chr2:237,085,884-237,097,933
- Strand
- +
- CDS length
- 522
- Amino acid length
- 174
- Gene symbol
- COPS8
- Gene type
- protein-coding
- Gene description
- COP9 signalosome subunit 8
- Gene Entrez Gene ID
- 10920
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 237,085,884 | 237,086,042 |
| 2 | 237,087,127 | 237,087,197 |
| 3 | 237,088,605 | 237,088,653 |
| 4 | 237,089,862 | 237,089,994 |
| 5 | 237,095,822 | 237,095,884 |
| 6 | 237,096,822 | 237,096,869 |
| 7 | 237,097,663 | 237,097,933 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 1 | CDS | 237,085,965 | 237,086,042 |
| 2 | CDS | 237,087,127 | 237,087,197 |
| 3 | CDS | 237,088,605 | 237,088,653 |
| 4 | CDS | 237,089,862 | 237,089,994 |
| 5 | CDS | 237,095,822 | 237,095,884 |
| 6 | CDS | 237,096,822 | 237,096,869 |
| 7 | CDS | 237,097,663 | 237,097,742 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr2 | 237,994,527 | 238,006,576 | Link |
CDS sequence
ATGCCAGTGGCGGTGATGGCGGAAAGCGCCTTTAGTTTCAAAAAGTTGCTGGATCAGTGCGAGAACCAGGAGCTCGAGGCCCCTGGAGGAATTGCTACACCCCCAGTGTATGGTCAGCTTCTAGCTTTATATTTGCTCCATAATGACATGAATAATGCAAGATATCTTTGGAAAAGAATACCACCTGCTATAAAATCTGCAAATTCTGAACTTGGGGGAATTTGGTCAGTAGGACAAAGAATCTGGCAGAGAGATTTCCCTGGGATCTATACAACCATCAACGCTCACCAGTGGTCTGAGACGGTCCAGCCAATTATGGAAGCACTTAGAGGCATATTAGAACAAGGATGGCAAGCTGATTCCACCACAAGAATGGTTCTGCCCAGAAAGCCAGTTGCAGGGGCCCTGGATGTTTCCTTTAACAAGTTTATTCCCTTATCAGAGCCTGCTCCAGTTCCCCCAATACCCAATGAACAGCAGTTAGCCAGACTGACGGATTATGTGGCTTTCCTTGAAAACTGA
Amino sequence
MPVAVMAESAFSFKKLLDQCENQELEAPGGIATPPVYGQLLALYLLHNDMNNARYLWKRIPPAIKSANSELGGIWSVGQRIWQRDFPGIYTTINAHQWSETVQPIMEALRGILEQGWQADSTTRMVLPRKPVAGALDVSFNKFIPLSEPAPVPPIPNEQQLARLTDYVAFLEN*