ENST00000507874.5 CLDND1
Information
- Transcript ID
- ENST00000507874.5
- Genome
- hg19
- Position
- chr3:98,219,684-98,241,766
- Strand
- -
- CDS length
- 633
- Amino acid length
- 211
- Gene symbol
- CLDND1
- Gene type
- protein-coding
- Gene description
- claudin domain containing 1
- Gene Entrez Gene ID
- 56650
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 6 | 98,219,684 | 98,220,364 |
| 5 | 98,235,896 | 98,236,033 |
| 4 | 98,237,729 | 98,237,839 |
| 3 | 98,239,977 | 98,240,286 |
| 2 | 98,240,497 | 98,240,562 |
| 1 | 98,241,693 | 98,241,766 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 6 | CDS | 98,220,273 | 98,220,364 |
| 5 | CDS | 98,235,896 | 98,236,033 |
| 4 | CDS | 98,237,729 | 98,237,839 |
| 3 | CDS | 98,239,977 | 98,240,268 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr3 | 98,500,840 | 98,522,922 | Link |
CDS sequence
ATGGATAACCGTTTTGCTACAGCATTTGTAATTGCTTGTGTGCTTAGCCTCATTTCCACCATCTACATGGCAGCCTCCATTGGCACAGACTTCTGGTATGAATATCGAAGTCCAGTTCAAGAAAATTCCAGTGATTTGAATAAAAGCATCTGGGATGAATTCATTAGTGATGAGGCAGATGAAAAGACTTATAATGATGCACTTTTTCGATACAATGGCACAGTGGGATTGTGGAGACGGTGTATCACCATACCCAAAAACATGCATTGGTATAGCCCACCAGAAAGGACAGAGTCATTTGATGTGGTCACAAAATGTGTGAGTTTCACACTAACTGAGCAGTTCATGGAGAAATTTGTTGATCCCGGAAACCACAATAGCGGGATTGATCTCCTTAGGACCTATCTTTGGCGTTGCCAGTTCCTTTTACCTTTTGTGAGTTTAGGTTTGATGTGCTTTGGGGCTTTGATCGGACTTTGTGCTTGCATTTGCCGAAGCTTATATCCCACCATTGCCACGGGCATTCTCCATCTCCTTGCAGTGACAAAGGAGAGCATGCTTCCAGCTGGAGCTGAGTCCAAGCACACAGCCACTCCTGCACACGCATGCGTGCAAACAGGGAAGCCCAAGTAG
Amino sequence
MDNRFATAFVIACVLSLISTIYMAASIGTDFWYEYRSPVQENSSDLNKSIWDEFISDEADEKTYNDALFRYNGTVGLWRRCITIPKNMHWYSPPERTESFDVVTKCVSFTLTEQFMEKFVDPGNHNSGIDLLRTYLWRCQFLLPFVSLGLMCFGALIGLCACICRSLYPTIATGILHLLAVTKESMLPAGAESKHTATPAHACVQTGKPK*