ENST00000554144.5 HOPX

Information
Transcript ID
ENST00000554144.5
Genome
hg19
Position
chr4:57,514,155-57,547,872
Strand
-
CDS length
339
Amino acid length
113
Gene symbol
HOPX
Gene type
protein-coding
Gene description
HOP homeobox
Gene Entrez Gene ID
84525
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
5 57,514,155 57,514,963
4 57,516,849 57,516,978
3 57,522,023 57,522,178
2 57,523,941 57,524,065
1 57,547,421 57,547,872
CDS
Exon number Type Start Stop
5 CDS 57,514,953 57,514,963
4 CDS 57,516,849 57,516,978
3 CDS 57,522,023 57,522,178
2 CDS 57,523,941 57,523,982
Other genome
Genome Chromosome Start End Links
hg38 chr4 56,647,989 56,681,706 Link
CDS sequence
ATGCTCATTTTCCTGGGCTGTTACAGAAGAAGACTGGAAGAGCGCGCAGGGACCATGTCGGCGGAGACCGCGAGCGGCCCCACAGAGGACCAGGTGGAAATCCTGGAGTACAACTTCAACAAGGTCGACAAGCACCCGGATTCCACCACGCTGTGCCTCATCGCGGCCGAGGCAGGCCTTTCCGAGGAGGAGACCCAGGGTAGTGATTTGATCTCCAGGAGCAAAATATGGCACCCAGAAAGTAGCCCCCAAAGAGAAGGCTACCCCCATGATAGTCTGCCGTGCTTGGCTTTCGATTACTTTTCTCTACTGCCGCCCCAGTGTAAAGAAATGGTTTAA
Amino sequence
MLIFLGCYRRRLEERAGTMSAETASGPTEDQVEILEYNFNKVDKHPDSTTLCLIAAEAGLSEEETQGSDLISRSKIWHPESSPQREGYPHDSLPCLAFDYFSLLPPQCKEMV*