ENST00000420433.6 HOPX

Information
Transcript ID
ENST00000420433.6
Genome
hg19
Position
chr4:57,514,164-57,547,462
Strand
-
CDS length
276
Amino acid length
92
Gene symbol
HOPX
Gene type
protein-coding
Gene description
HOP homeobox
Gene Entrez Gene ID
84525
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
4 57,514,164 57,514,963
3 57,522,023 57,522,178
2 57,523,941 57,524,065
1 57,547,421 57,547,462
CDS
Exon number Type Start Stop
4 CDS 57,514,886 57,514,963
3 CDS 57,522,023 57,522,178
2 CDS 57,523,941 57,523,982
Other genome
Genome Chromosome Start End Links
hg38 chr4 56,647,998 56,681,296 Link
CDS sequence
ATGCTCATTTTCCTGGGCTGTTACAGAAGAAGACTGGAAGAGCGCGCAGGGACCATGTCGGCGGAGACCGCGAGCGGCCCCACAGAGGACCAGGTGGAAATCCTGGAGTACAACTTCAACAAGGTCGACAAGCACCCGGATTCCACCACGCTGTGCCTCATCGCGGCCGAGGCAGGCCTTTCCGAGGAGGAGACCCAGAAATGGTTTAAGCAGCGCCTGGCAAAGTGGCGGCGCTCAGAAGGCCTGCCCTCAGAGTGCAGATCCGTCACAGACTAA
Amino sequence
MLIFLGCYRRRLEERAGTMSAETASGPTEDQVEILEYNFNKVDKHPDSTTLCLIAAEAGLSEEETQKWFKQRLAKWRRSEGLPSECRSVTD*