ENST00000504452.5 PRDM8

Information
Transcript ID
ENST00000504452.5
Genome
hg19
Position
chr4:81,105,439-81,125,483
Strand
+
CDS length
2,070
Amino acid length
690
Gene symbol
PRDM8
Gene type
protein-coding
Gene description
PR/SET domain 8
Gene Entrez Gene ID
56978
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 81,105,439 81,105,505
2 81,115,267 81,115,393
3 81,117,506 81,117,755
4 81,118,117 81,118,370
5 81,118,779 81,118,917
6 81,121,233 81,121,453
7 81,122,444 81,122,675
8 81,123,068 81,125,483
CDS
Exon number Type Start Stop
6 CDS 81,121,235 81,121,453
7 CDS 81,122,444 81,122,675
8 CDS 81,123,068 81,124,686
Other genome
Genome Chromosome Start End Links
hg38 chr4 80,184,285 80,204,329 Link
CDS sequence
ATGGAGGATACTGGCATCCAGCGAGGCATCTGGGATGGAGATGCCAAGGCTGTCCAACAATGTCTGACAGATATTTTTACCAGCGTTTACACCACCTGCGACATCCCTGAGAATGCTATATTTGGTCCCTGTGTCCTGAGCCATACTTCCCTATATGACAGCATAGCTTTCATAGCTCTCAAGTCTACTGACAAGAGAACAGTACCGTATATCTTTCGGGTAGACACCTCAGCAGCAAATGGTTCCTCAGAAGGTCTCATGTGGCTGCGGTTGGTCCAATCGGCCAGAGATAAGGAAGAGCAGAACCTTGAAGCCTACATAAAAAACGGACAGCTGTTCTACCGCTCTCTCCGCAGGATTGCCAAAGACGAGGAGTTACTAGTTTGGTACGGGAAAGAACTGACTGAGTTACTCTTGCTCTGCCCCTCTAGATCCCACAACAAAATGAATGGGTCGTCCCCTTACACATGCCTGGAATGCAGCCAACGTTTCCAGTTTGAGTTCCCCTATGTGGCGCATCTGCGTTTCCGCTGCCCCAAGAGACTTCACAGCGCTGATATAAGTCCCCAAGACGAACAAGGCGGCGGCGTGGGCACCAAGGACCACGGGGGCGGCGGCGGCGGTGGCAAAGACCAGCAGCAGCAGCAGCAGGAGGCACCTTTAGGCCCGGGTCCCAAGTTTTGCAAAGCCGGCCCCCTCCACCACTACCCATCCCCCTCCCCGGAAAGCAGCAACCCATCCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCATCCACAGACTTCCACAACCTGGCCAGGGAGCTGGAAAACTCCCGGGGAGGCAGCAGCTGCTCCCCAGCCCAGAGCCTCAGCAGCGGTAGCGGCAGCGGCGGCGGCGGCGGCCACCAGGAGGCGGAGCTGAGTCCCGACGGCATCGCCACGGGCGGCGGCAAAGGAAAGAGGAAATTCCCGGAGGAGGCGGCGGAGGGCGGCGGTGGCGCTGGTCTGGTAGGGGGCCGGGGCCGCTTCGTAGAGCGGCCCCTCCCGGCCTCCAAGGAGGATCTGGTGTGCACACCGCAGCAGTACCGAGCCTCGGGCAGCTACTTCGGCCTGGAAGAGAACGGCCGCCTCTTCGCGCCGCCAAGTCCCGAGACGGGCGAGGCGAAGCGCAGCGCCTTCGTGGAGGTGAAGAAGGCTGCCCGCGCGGCCAGCCTGCAGGAGGAGGGGACAGCCGACGGCGCGGGAGTCGCCTCCGAGGACCAGGACGCTGGCGGCGGCGGCGGCTCCTCCACGCCCGCGGCCGCGTCACCGGTGGGCGCCGAGAAGCTGCTGGCCCCGCGGCCTGGGGGCCCGCTGCCCAGCCGGCTCGAGGGCGGCAGTCCTGCGAGGGGCAGCGCCTTCACTTCGGTGCCGCAGCTGGGCAGCGCGGGCAGCACCAGCGGTGGGGGCGGAACGGGCGCCGGGGCCGCAGGCGGCGCGGGCGGGGGCCAGGGCGCCGCGTCGGACGAGCGCAAAAGCGCCTTCTCGCAGCCAGCACGCTCTTTCTCGCAGCTGTCCCCGCTGGTGCTGGGCCAGAAGCTGGGCGCGCTCGAGCCATGCCACCCCGCCGACGGCGTGGGCCCCACCAGACTCTATCCCGCCGCCGCGGACCCTCTAGCGGTGAAGCTCCAGGGGGCCGCGGACCTGAACGGAGGTTGCGGGTCCCTGCCGAGCGGCGGCGGCGGCCTGCCTAAGCAGAGCCCCTTCCTGTACGCCACCGCCTTCTGGCCCAAGAGCTCCGCTGCCGCTGCAGCCGCGGCTGCGGCGGCGGCCGCGGGGCCCTTGCAGCTGCAGCTGCCCTCGGCGCTCACGCTGCTGCCGCCCTCCTTCACCTCGCTGTGTCTGCCCGCGCAGAACTGGTGCGCCAAGTGCAATGCCTCCTTCCGCATGACCTCCGACCTGGTGTACCATATGAGGTCGCACCACAAAAAGGAGTATGCGATGGAGCCCTTGGTGAAGCGGCGGCGAGAGGAGAAACTCAAGTGCCCCATCTGCAATGAGTCCTTCAGGGAGCGCCACCACCTCTCCAGGCACATGACCTCGCATAATTGA
Amino sequence
MEDTGIQRGIWDGDAKAVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAFIALKSTDKRTVPYIFRVDTSAANGSSEGLMWLRLVQSARDKEEQNLEAYIKNGQLFYRSLRRIAKDEELLVWYGKELTELLLLCPSRSHNKMNGSSPYTCLECSQRFQFEFPYVAHLRFRCPKRLHSADISPQDEQGGGVGTKDHGGGGGGGKDQQQQQQEAPLGPGPKFCKAGPLHHYPSPSPESSNPSAAAGGSSAKPSTDFHNLARELENSRGGSSCSPAQSLSSGSGSGGGGGHQEAELSPDGIATGGGKGKRKFPEEAAEGGGGAGLVGGRGRFVERPLPASKEDLVCTPQQYRASGSYFGLEENGRLFAPPSPETGEAKRSAFVEVKKAARAASLQEEGTADGAGVASEDQDAGGGGGSSTPAAASPVGAEKLLAPRPGGPLPSRLEGGSPARGSAFTSVPQLGSAGSTSGGGGTGAGAAGGAGGGQGAASDERKSAFSQPARSFSQLSPLVLGQKLGALEPCHPADGVGPTRLYPAAADPLAVKLQGAADLNGGCGSLPSGGGGLPKQSPFLYATAFWPKSSAAAAAAAAAAAAGPLQLQLPSALTLLPPSFTSLCLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEYAMEPLVKRRREEKLKCPICNESFRERHHLSRHMTSHN*