ENST00000504452.5 PRDM8

Information
Transcript ID
ENST00000504452.5
Genome
hg38
Position
chr4:80,184,285-80,204,329
Strand
+
CDS length
2,070
Amino acid length
690
Gene symbol
PRDM8
Gene type
protein-coding
Gene description
PR/SET domain 8
Gene Entrez Gene ID
56978
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 80,184,285 80,184,351
2 80,194,113 80,194,239
3 80,196,352 80,196,601
4 80,196,963 80,197,216
5 80,197,625 80,197,763
6 80,200,079 80,200,299
7 80,201,290 80,201,521
8 80,201,914 80,204,329
CDS
Exon number Type Start Stop
6 CDS 80,200,081 80,200,299
7 CDS 80,201,290 80,201,521
8 CDS 80,201,914 80,203,532
Other genome
Genome Chromosome Start End Links
hg19 chr4 81,105,439 81,125,483 Link
CDS sequence
ATGGAGGATACTGGCATCCAGCGAGGCATCTGGGATGGAGATGCCAAGGCTGTCCAACAATGTCTGACAGATATTTTTACCAGCGTTTACACCACCTGCGACATCCCTGAGAATGCTATATTTGGTCCCTGTGTCCTGAGCCATACTTCCCTATATGACAGCATAGCTTTCATAGCTCTCAAGTCTACTGACAAGAGAACAGTACCGTATATCTTTCGGGTAGACACCTCAGCAGCAAATGGTTCCTCAGAAGGTCTCATGTGGCTGCGGTTGGTCCAATCGGCCAGAGATAAGGAAGAGCAGAACCTTGAAGCCTACATAAAAAACGGACAGCTGTTCTACCGCTCTCTCCGCAGGATTGCCAAAGACGAGGAGTTACTAGTTTGGTACGGGAAAGAACTGACTGAGTTACTCTTGCTCTGCCCCTCTAGATCCCACAACAAAATGAATGGGTCGTCCCCTTACACATGCCTGGAATGCAGCCAACGTTTCCAGTTTGAGTTCCCCTATGTGGCGCATCTGCGTTTCCGCTGCCCCAAGAGACTTCACAGCGCTGATATAAGTCCCCAAGACGAACAAGGCGGCGGCGTGGGCACCAAGGACCACGGGGGCGGCGGCGGCGGTGGCAAAGACCAGCAGCAGCAGCAGCAGGAGGCACCTTTAGGCCCGGGTCCCAAGTTTTGCAAAGCCGGCCCCCTCCACCACTACCCATCCCCCTCCCCGGAAAGCAGCAACCCATCCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCATCCACAGACTTCCACAACCTGGCCAGGGAGCTGGAAAACTCCCGGGGAGGCAGCAGCTGCTCCCCAGCCCAGAGCCTCAGCAGCGGTAGCGGCAGCGGCGGCGGCGGCGGCCACCAGGAGGCGGAGCTGAGTCCCGACGGCATCGCCACGGGCGGCGGCAAAGGAAAGAGGAAATTCCCGGAGGAGGCGGCGGAGGGCGGCGGTGGCGCTGGTCTGGTAGGGGGCCGGGGCCGCTTCGTAGAGCGGCCCCTCCCGGCCTCCAAGGAGGATCTGGTGTGCACACCGCAGCAGTACCGAGCCTCGGGCAGCTACTTCGGCCTGGAAGAGAACGGCCGCCTCTTCGCGCCGCCAAGTCCCGAGACGGGCGAGGCGAAGCGCAGCGCCTTCGTGGAGGTGAAGAAGGCTGCCCGCGCGGCCAGCCTGCAGGAGGAGGGGACAGCCGACGGCGCGGGAGTCGCCTCCGAGGACCAGGACGCTGGCGGCGGCGGCGGCTCCTCCACGCCCGCGGCCGCGTCACCGGTGGGCGCCGAGAAGCTGCTGGCCCCGCGGCCTGGGGGCCCGCTGCCCAGCCGGCTCGAGGGCGGCAGTCCTGCGAGGGGCAGCGCCTTCACTTCGGTGCCGCAGCTGGGCAGCGCGGGCAGCACCAGCGGTGGGGGCGGAACGGGCGCCGGGGCCGCAGGCGGCGCGGGCGGGGGCCAGGGCGCCGCGTCGGACGAGCGCAAAAGCGCCTTCTCGCAGCCAGCACGCTCTTTCTCGCAGCTGTCCCCGCTGGTGCTGGGCCAGAAGCTGGGCGCGCTCGAGCCATGCCACCCCGCCGACGGCGTGGGCCCCACCAGACTCTATCCCGCCGCCGCGGACCCTCTAGCGGTGAAGCTCCAGGGGGCCGCGGACCTGAACGGAGGTTGCGGGTCCCTGCCGAGCGGCGGCGGCGGCCTGCCTAAGCAGAGCCCCTTCCTGTACGCCACCGCCTTCTGGCCCAAGAGCTCCGCTGCCGCTGCAGCCGCGGCTGCGGCGGCGGCCGCGGGGCCCTTGCAGCTGCAGCTGCCCTCGGCGCTCACGCTGCTGCCGCCCTCCTTCACCTCGCTGTGTCTGCCCGCGCAGAACTGGTGCGCCAAGTGCAATGCCTCCTTCCGCATGACCTCCGACCTGGTGTACCATATGAGGTCGCACCACAAAAAGGAGTATGCGATGGAGCCCTTGGTGAAGCGGCGGCGAGAGGAGAAACTCAAGTGCCCCATCTGCAATGAGTCCTTCAGGGAGCGCCACCACCTCTCCAGGCACATGACCTCGCATAATTGA
Amino sequence
MEDTGIQRGIWDGDAKAVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAFIALKSTDKRTVPYIFRVDTSAANGSSEGLMWLRLVQSARDKEEQNLEAYIKNGQLFYRSLRRIAKDEELLVWYGKELTELLLLCPSRSHNKMNGSSPYTCLECSQRFQFEFPYVAHLRFRCPKRLHSADISPQDEQGGGVGTKDHGGGGGGGKDQQQQQQEAPLGPGPKFCKAGPLHHYPSPSPESSNPSAAAGGSSAKPSTDFHNLARELENSRGGSSCSPAQSLSSGSGSGGGGGHQEAELSPDGIATGGGKGKRKFPEEAAEGGGGAGLVGGRGRFVERPLPASKEDLVCTPQQYRASGSYFGLEENGRLFAPPSPETGEAKRSAFVEVKKAARAASLQEEGTADGAGVASEDQDAGGGGGSSTPAAASPVGAEKLLAPRPGGPLPSRLEGGSPARGSAFTSVPQLGSAGSTSGGGGTGAGAAGGAGGGQGAASDERKSAFSQPARSFSQLSPLVLGQKLGALEPCHPADGVGPTRLYPAAADPLAVKLQGAADLNGGCGSLPSGGGGLPKQSPFLYATAFWPKSSAAAAAAAAAAAAGPLQLQLPSALTLLPPSFTSLCLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEYAMEPLVKRRREEKLKCPICNESFRERHHLSRHMTSHN*