ENST00000511481.5 SEC24D

Information
Transcript ID
ENST00000511481.5
Genome
hg19
Position
chr4:119,644,179-119,690,995
Strand
-
CDS length
1,992
Amino acid length
664
Gene symbol
SEC24D
Gene type
protein-coding
Gene description
SEC24 homolog D, COPII coat complex component
Gene Entrez Gene ID
9871
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
16 119,644,179 119,644,810
15 119,649,716 119,649,805
14 119,652,471 119,652,662
13 119,653,888 119,654,067
12 119,659,416 119,659,534
11 119,660,304 119,660,442
10 119,661,818 119,661,963
9 119,662,096 119,662,192
8 119,665,143 119,665,313
7 119,666,099 119,666,215
6 119,673,151 119,673,244
5 119,673,852 119,674,043
4 119,678,876 119,679,000
3 119,685,957 119,686,072
2 119,689,328 119,689,466
1 119,690,919 119,690,995
CDS
Exon number Type Start Stop
16 CDS 119,644,670 119,644,810
15 CDS 119,649,716 119,649,805
14 CDS 119,652,471 119,652,662
13 CDS 119,653,888 119,654,067
12 CDS 119,659,416 119,659,534
11 CDS 119,660,304 119,660,442
10 CDS 119,661,818 119,661,963
9 CDS 119,662,096 119,662,192
8 CDS 119,665,143 119,665,313
7 CDS 119,666,099 119,666,215
6 CDS 119,673,151 119,673,244
5 CDS 119,673,852 119,674,043
4 CDS 119,678,876 119,679,000
3 CDS 119,685,957 119,686,072
2 CDS 119,689,328 119,689,400
Other genome
Genome Chromosome Start End Links
hg38 chr4 118,723,024 118,769,840 Link
CDS sequence
ATGTGCCCATTTATGCAGTTCATCGAAGGAGGAAGGAGATATCAGTGTGGATTTTGCAACTGTGTGAATGATGTTCCACCATTCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTTATGAATATGTTGCCACTTTGGATTATTGCAGAAAGAGTAAGCCTCCCAACCCACCAGCCTTTATCTTCATGATTGATGTTTCATATAGTAACATAAAGAATGGACTTGTCAAGCTCATATGTGAAGAACTGAAGACCATGCTGGAAAAAATTCCAAAGGAAGAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTTATCACATATAACAAAGTTCTCCATTTCTTTAATGTGAAGAGTAATCTGGCCCAGCCTCAGATGATGGTGGTGACTGATGTTGGAGAAGTCTTTGTTCCTTTGTTGGATGGTTTCCTTGTCAACTATCAAGAATCCCAATCTGTGATTCATAATTTGTTGGACCAGATTCCAGACATGTTTGCAGACTCTAATGAAAATGAGACTGTCTTTGCTCCTGTCATCCAGGCTGGCATGGAAGCACTAAAGGCAGCAGACTGTCCTGGGAAGCTGTTCATCTTCCATTCTTCCTTGCCAACTGCTGAAGCACCAGGGAAGCTCAAAAACAGAGATGACAAAAAACTGGTTAATACAGACAAAGAGAAGATACTTTTCCAGCCCCAAACAAATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGACACTCTTCCTCTTTCCTAGTCAGTATGTGGACGTGGCCTCGCTGGGGCTGGTTCCTCAGCTCACTGGAGGAACCCTTTACAAATACAACAATTTCCAGATGCACTTGGATAGACAACAATTTTTGAACGACCTCAGAAATGATATTGAAAAGAAAATAGGCTTTGATGCTATTATGAGGGTTCGTACCAGCACAGGTTTCAGAGCCACTGATTTCTTTGGTGGAATCTTGATGAACAACACCACCGATGTAGAAATGGCTGCCATCGATTGTGACAAGGCAGTGACCGTGGAGTTCAAGCACGATGACAAACTCAGTGAAGACAGTGGAGCCTTAATCCAGTGTGCTGTGCTTTACACGACAATCAGTGGTCAAAGAAGACTTCGGATTCACAATCTTGGCTTAAACTGCAGCTCTCAGCTAGCTGATCTTTATAAGAGCTGTGAGACAGATGCTCTTATCAACTTCTTTGCCAAGTCAGCTTTTAAAGCAGTTCTCCACCAGCCTTTGAAGGTCATCCGGGAAATTCTAGTTAATCAGACTGCCCATATGTTGGCATGTTACCGGAAGAATTGTGCAAGTCCTTCTGCAGCAAGCCAGCTTATTCTACCAGATTCCATGAAAGTATTGCCAGTGTACATGAATTGCTTGTTGAAAAACTGTGTACTACTCAGCAGACCAGAGATCTCAACTGATGAACGAGCATACCAGAGACAGCTGGTCATGACCATGGGTGTGGCTGACTCTCAGCTTTTCTTCTACCCACAACTTCTGCCCATACACACGTTAGATGTCAAGAGTACAATGTTACCTGCTGCCGTTCGTTGCTCTGAGTCCCGTCTTTCAGAAGAAGGAATATTCTTACTGGCTAATGGTCTACACATGTTCCTGTGGTTGGGAGTAAGCAGCCCACCAGAACTGATCCAAGGAATATTTAATGTGCCATCTTTTGCACATATCAACACAGATATGACATTGCTGCCTGAAGTGGGAAACCCATACTCTCAACAACTCAGAATGATAATGGGTATTATCCAACAAAAGAGGCCATATTCAATGAAGCTCACAATTGTAAAGCAGCGAGAACAACCAGAAATGGTTTTCCGACAGTTCCTGGTAGAAGACAAAGGACTTTACGGAGGCTCTTCTTATGTGGATTTCCTTTGTTGTGTTCACAAGGAGATCTGTCAGCTGCTTAATTAA
Amino sequence
MCPFMQFIEGGRRYQCGFCNCVNDVPPFYFQHLDHIGRRLDHYEKPELSLGSYEYVATLDYCRKSKPPNPPAFIFMIDVSYSNIKNGLVKLICEELKTMLEKIPKEEQEETSAIRVGFITYNKVLHFFNVKSNLAQPQMMVVTDVGEVFVPLLDGFLVNYQESQSVIHNLLDQIPDMFADSNENETVFAPVIQAGMEALKAADCPGKLFIFHSSLPTAEAPGKLKNRDDKKLVNTDKEKILFQPQTNVYDSLAKDCVAHGCSVTLFLFPSQYVDVASLGLVPQLTGGTLYKYNNFQMHLDRQQFLNDLRNDIEKKIGFDAIMRVRTSTGFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFKHDDKLSEDSGALIQCAVLYTTISGQRRLRIHNLGLNCSSQLADLYKSCETDALINFFAKSAFKAVLHQPLKVIREILVNQTAHMLACYRKNCASPSAASQLILPDSMKVLPVYMNCLLKNCVLLSRPEISTDERAYQRQLVMTMGVADSQLFFYPQLLPIHTLDVKSTMLPAAVRCSESRLSEEGIFLLANGLHMFLWLGVSSPPELIQGIFNVPSFAHINTDMTLLPEVGNPYSQQLRMIMGIIQQKRPYSMKLTIVKQREQPEMVFRQFLVEDKGLYGGSSYVDFLCCVHKEICQLLN*