ENST00000511481.5 SEC24D

Information
Transcript ID
ENST00000511481.5
Genome
hg38
Position
chr4:118,723,024-118,769,840
Strand
-
CDS length
1,992
Amino acid length
664
Gene symbol
SEC24D
Gene type
protein-coding
Gene description
SEC24 homolog D, COPII coat complex component
Gene Entrez Gene ID
9871
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
16 118,723,024 118,723,655
15 118,728,561 118,728,650
14 118,731,316 118,731,507
13 118,732,733 118,732,912
12 118,738,261 118,738,379
11 118,739,149 118,739,287
10 118,740,663 118,740,808
9 118,740,941 118,741,037
8 118,743,988 118,744,158
7 118,744,944 118,745,060
6 118,751,996 118,752,089
5 118,752,697 118,752,888
4 118,757,721 118,757,845
3 118,764,802 118,764,917
2 118,768,173 118,768,311
1 118,769,764 118,769,840
CDS
Exon number Type Start Stop
16 CDS 118,723,515 118,723,655
15 CDS 118,728,561 118,728,650
14 CDS 118,731,316 118,731,507
13 CDS 118,732,733 118,732,912
12 CDS 118,738,261 118,738,379
11 CDS 118,739,149 118,739,287
10 CDS 118,740,663 118,740,808
9 CDS 118,740,941 118,741,037
8 CDS 118,743,988 118,744,158
7 CDS 118,744,944 118,745,060
6 CDS 118,751,996 118,752,089
5 CDS 118,752,697 118,752,888
4 CDS 118,757,721 118,757,845
3 CDS 118,764,802 118,764,917
2 CDS 118,768,173 118,768,245
Other genome
Genome Chromosome Start End Links
hg19 chr4 119,644,179 119,690,995 Link
CDS sequence
ATGTGCCCATTTATGCAGTTCATCGAAGGAGGAAGGAGATATCAGTGTGGATTTTGCAACTGTGTGAATGATGTTCCACCATTCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTTATGAATATGTTGCCACTTTGGATTATTGCAGAAAGAGTAAGCCTCCCAACCCACCAGCCTTTATCTTCATGATTGATGTTTCATATAGTAACATAAAGAATGGACTTGTCAAGCTCATATGTGAAGAACTGAAGACCATGCTGGAAAAAATTCCAAAGGAAGAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTTATCACATATAACAAAGTTCTCCATTTCTTTAATGTGAAGAGTAATCTGGCCCAGCCTCAGATGATGGTGGTGACTGATGTTGGAGAAGTCTTTGTTCCTTTGTTGGATGGTTTCCTTGTCAACTATCAAGAATCCCAATCTGTGATTCATAATTTGTTGGACCAGATTCCAGACATGTTTGCAGACTCTAATGAAAATGAGACTGTCTTTGCTCCTGTCATCCAGGCTGGCATGGAAGCACTAAAGGCAGCAGACTGTCCTGGGAAGCTGTTCATCTTCCATTCTTCCTTGCCAACTGCTGAAGCACCAGGGAAGCTCAAAAACAGAGATGACAAAAAACTGGTTAATACAGACAAAGAGAAGATACTTTTCCAGCCCCAAACAAATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGACACTCTTCCTCTTTCCTAGTCAGTATGTGGACGTGGCCTCGCTGGGGCTGGTTCCTCAGCTCACTGGAGGAACCCTTTACAAATACAACAATTTCCAGATGCACTTGGATAGACAACAATTTTTGAACGACCTCAGAAATGATATTGAAAAGAAAATAGGCTTTGATGCTATTATGAGGGTTCGTACCAGCACAGGTTTCAGAGCCACTGATTTCTTTGGTGGAATCTTGATGAACAACACCACCGATGTAGAAATGGCTGCCATCGATTGTGACAAGGCAGTGACCGTGGAGTTCAAGCACGATGACAAACTCAGTGAAGACAGTGGAGCCTTAATCCAGTGTGCTGTGCTTTACACGACAATCAGTGGTCAAAGAAGACTTCGGATTCACAATCTTGGCTTAAACTGCAGCTCTCAGCTAGCTGATCTTTATAAGAGCTGTGAGACAGATGCTCTTATCAACTTCTTTGCCAAGTCAGCTTTTAAAGCAGTTCTCCACCAGCCTTTGAAGGTCATCCGGGAAATTCTAGTTAATCAGACTGCCCATATGTTGGCATGTTACCGGAAGAATTGTGCAAGTCCTTCTGCAGCAAGCCAGCTTATTCTACCAGATTCCATGAAAGTATTGCCAGTGTACATGAATTGCTTGTTGAAAAACTGTGTACTACTCAGCAGACCAGAGATCTCAACTGATGAACGAGCATACCAGAGACAGCTGGTCATGACCATGGGTGTGGCTGACTCTCAGCTTTTCTTCTACCCACAACTTCTGCCCATACACACGTTAGATGTCAAGAGTACAATGTTACCTGCTGCCGTTCGTTGCTCTGAGTCCCGTCTTTCAGAAGAAGGAATATTCTTACTGGCTAATGGTCTACACATGTTCCTGTGGTTGGGAGTAAGCAGCCCACCAGAACTGATCCAAGGAATATTTAATGTGCCATCTTTTGCACATATCAACACAGATATGACATTGCTGCCTGAAGTGGGAAACCCATACTCTCAACAACTCAGAATGATAATGGGTATTATCCAACAAAAGAGGCCATATTCAATGAAGCTCACAATTGTAAAGCAGCGAGAACAACCAGAAATGGTTTTCCGACAGTTCCTGGTAGAAGACAAAGGACTTTACGGAGGCTCTTCTTATGTGGATTTCCTTTGTTGTGTTCACAAGGAGATCTGTCAGCTGCTTAATTAA
Amino sequence
MCPFMQFIEGGRRYQCGFCNCVNDVPPFYFQHLDHIGRRLDHYEKPELSLGSYEYVATLDYCRKSKPPNPPAFIFMIDVSYSNIKNGLVKLICEELKTMLEKIPKEEQEETSAIRVGFITYNKVLHFFNVKSNLAQPQMMVVTDVGEVFVPLLDGFLVNYQESQSVIHNLLDQIPDMFADSNENETVFAPVIQAGMEALKAADCPGKLFIFHSSLPTAEAPGKLKNRDDKKLVNTDKEKILFQPQTNVYDSLAKDCVAHGCSVTLFLFPSQYVDVASLGLVPQLTGGTLYKYNNFQMHLDRQQFLNDLRNDIEKKIGFDAIMRVRTSTGFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFKHDDKLSEDSGALIQCAVLYTTISGQRRLRIHNLGLNCSSQLADLYKSCETDALINFFAKSAFKAVLHQPLKVIREILVNQTAHMLACYRKNCASPSAASQLILPDSMKVLPVYMNCLLKNCVLLSRPEISTDERAYQRQLVMTMGVADSQLFFYPQLLPIHTLDVKSTMLPAAVRCSESRLSEEGIFLLANGLHMFLWLGVSSPPELIQGIFNVPSFAHINTDMTLLPEVGNPYSQQLRMIMGIIQQKRPYSMKLTIVKQREQPEMVFRQFLVEDKGLYGGSSYVDFLCCVHKEICQLLN*