ENST00000642713.1 GYPA
Information
- Transcript ID
- ENST00000642713.1
- Genome
- hg19
- Position
- chr4:145,032,508-145,061,814
- Strand
- -
- CDS length
- 375
- Amino acid length
- 125
- Gene symbol
- GYPA
- Gene type
- protein-coding
- Gene description
- glycophorin A (MNS blood group)
- Gene Entrez Gene ID
- 2993
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 8 | 145,032,508 | 145,032,563 |
| 7 | 145,035,842 | 145,035,920 |
| 6 | 145,038,007 | 145,038,092 |
| 5 | 145,039,867 | 145,039,905 |
| 4 | 145,040,839 | 145,040,934 |
| 3 | 145,041,643 | 145,041,741 |
| 2 | 145,044,025 | 145,044,142 |
| 1 | 145,061,752 | 145,061,814 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 8 | CDS | 145,032,547 | 145,032,563 |
| 7 | CDS | 145,035,842 | 145,035,920 |
| 6 | CDS | 145,038,007 | 145,038,092 |
| 5 | CDS | 145,039,867 | 145,039,905 |
| 4 | CDS | 145,040,839 | 145,040,934 |
| 3 | CDS | 145,041,643 | 145,041,700 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr4 | 144,111,355 | 144,140,661 | Link |
CDS sequence
ATGCACACTTCAACTTCTTCTTCAGTCACAAAGAGTTACATCTCATCACAGACAAATGATACGCACAAACGGGACACATATGCAGCCACTCCTAGAGCTCATGAAGTTTCAGAAATTTCTGTTAGAACTGTTTACCCTCCAGAAGAGGAAACCGGAGAAAGGGTACAACTTGCCCATCATTTCTCTGAACCAGAGATAACACTCATTATTTTTGGGGTGATGGCTGGTGTTATTGGAACGATCCTCTTAATTTCTTACGGTATTCGCCGACTGATAAAGAAAAGCCCATCTGATGTAAAACCTCTCCCCTCACCTGACACAGACGTGCCTTTAAGTTCTGTTGAAATAGAAAATCCAGAGACAAGTGATCAATGA
Amino sequence
MHTSTSSSVTKSYISSQTNDTHKRDTYAATPRAHEVSEISVRTVYPPEEETGERVQLAHHFSEPEITLIIFGVMAGVIGTILLISYGIRRLIKKSPSDVKPLPSPDTDVPLSSVEIENPETSDQ*