ENST00000439343.2 BLOC1S5-TXNDC5
Information
- Transcript ID
- ENST00000439343.2
- Genome
- hg19
- Position
- chr6:7,881,755-8,064,597
- Strand
- -
- CDS length
- 411
- Amino acid length
- 137
- Gene symbol
- BLOC1S5-TXNDC5
- Gene type
- ncRNA
- Gene description
- BLOC1S5-TXNDC5 readthrough (NMD candidate)
- Gene Entrez Gene ID
- 100526836
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 13 | 7,881,755 | 7,883,499 |
| 12 | 7,884,592 | 7,884,721 |
| 11 | 7,886,194 | 7,886,276 |
| 10 | 7,888,938 | 7,889,081 |
| 9 | 7,889,728 | 7,889,814 |
| 8 | 7,891,854 | 7,891,969 |
| 7 | 7,895,339 | 7,895,435 |
| 6 | 7,899,809 | 7,899,914 |
| 5 | 7,904,807 | 7,904,956 |
| 4 | 8,026,600 | 8,026,658 |
| 3 | 8,041,372 | 8,041,501 |
| 2 | 8,062,767 | 8,062,849 |
| 1 | 8,064,498 | 8,064,597 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 7,904,918 | 7,904,956 |
| 4 | CDS | 8,026,600 | 8,026,658 |
| 3 | CDS | 8,041,372 | 8,041,501 |
| 2 | CDS | 8,062,767 | 8,062,849 |
| 1 | CDS | 8,064,498 | 8,064,597 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr6 | 7,881,522 | 8,064,364 | Link |
CDS sequence
GGGACAGAGACCCCTGTGGGTTGTGAGGCCGCCCCGGGCGGTGGCAGCAAGAAGAGGGACTCCCTGGGGACTGCGGGCTCAGCGCACCTCATTATCAAGGATCTTGGAGAAATTCATTCAAGGCTTTTGGATCACAGACCAGTTATTCAAGGTGAAACTCGTTATTTTGTAAAAGAATTTGAAGAAAAACGTGGTCTTCGAGAAATGCGAGTTCTTGAAAATTTGAAGAACATGATCCATGAAACAAATGAACATACTCTTCCCAAATGTAGAGACACAATGCGGGACAGCCTCAGCCAGGTTCTCCAGAGATTGCAAGCAGCTAATGACTCAGTCTGTAGACTCCAACAGAGGGAACAGGAACGAAAAAAGGTGTGGACACTGCCAGCGGCTGCAGCCGACTTGGAATGA
Amino sequence
GTETPVGCEAAPGGGSKKRDSLGTAGSAHLIIKDLGEIHSRLLDHRPVIQGETRYFVKEFEEKRGLREMRVLENLKNMIHETNEHTLPKCRDTMRDSLSQVLQRLQAANDSVCRLQQREQERKKVWTLPAAAADLE*