ENST00000439343.2 BLOC1S5-TXNDC5
Information
- Transcript ID
- ENST00000439343.2
- Genome
- hg38
- Position
- chr6:7,881,522-8,064,364
- Strand
- -
- CDS length
- 411
- Amino acid length
- 137
- Gene symbol
- BLOC1S5-TXNDC5
- Gene type
- ncRNA
- Gene description
- BLOC1S5-TXNDC5 readthrough (NMD candidate)
- Gene Entrez Gene ID
- 100526836
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 13 | 7,881,522 | 7,883,266 |
| 12 | 7,884,359 | 7,884,488 |
| 11 | 7,885,961 | 7,886,043 |
| 10 | 7,888,705 | 7,888,848 |
| 9 | 7,889,495 | 7,889,581 |
| 8 | 7,891,621 | 7,891,736 |
| 7 | 7,895,106 | 7,895,202 |
| 6 | 7,899,576 | 7,899,681 |
| 5 | 7,904,574 | 7,904,723 |
| 4 | 8,026,367 | 8,026,425 |
| 3 | 8,041,139 | 8,041,268 |
| 2 | 8,062,534 | 8,062,616 |
| 1 | 8,064,265 | 8,064,364 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 5 | CDS | 7,904,685 | 7,904,723 |
| 4 | CDS | 8,026,367 | 8,026,425 |
| 3 | CDS | 8,041,139 | 8,041,268 |
| 2 | CDS | 8,062,534 | 8,062,616 |
| 1 | CDS | 8,064,265 | 8,064,364 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr6 | 7,881,755 | 8,064,597 | Link |
CDS sequence
GGGACAGAGACCCCTGTGGGTTGTGAGGCCGCCCCGGGCGGTGGCAGCAAGAAGAGGGACTCCCTGGGGACTGCGGGCTCAGCGCACCTCATTATCAAGGATCTTGGAGAAATTCATTCAAGGCTTTTGGATCACAGACCAGTTATTCAAGGTGAAACTCGTTATTTTGTAAAAGAATTTGAAGAAAAACGTGGTCTTCGAGAAATGCGAGTTCTTGAAAATTTGAAGAACATGATCCATGAAACAAATGAACATACTCTTCCCAAATGTAGAGACACAATGCGGGACAGCCTCAGCCAGGTTCTCCAGAGATTGCAAGCAGCTAATGACTCAGTCTGTAGACTCCAACAGAGGGAACAGGAACGAAAAAAGGTGTGGACACTGCCAGCGGCTGCAGCCGACTTGGAATGA
Amino sequence
GTETPVGCEAAPGGGSKKRDSLGTAGSAHLIIKDLGEIHSRLLDHRPVIQGETRYFVKEFEEKRGLREMRVLENLKNMIHETNEHTLPKCRDTMRDSLSQVLQRLQAANDSVCRLQQREQERKKVWTLPAAAADLE*