ENST00000445902.3 VPS52

Information
Transcript ID
ENST00000445902.3
Genome
hg19
Position
chr6:33,218,055-33,239,653
Strand
-
CDS length
2,172
Amino acid length
724
Gene symbol
VPS52
Gene type
protein-coding
Gene description
VPS52 subunit of GARP complex
Gene Entrez Gene ID
6293
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
20 33,218,055 33,218,764
19 33,219,295 33,219,413
18 33,219,637 33,219,748
17 33,231,261 33,231,326
16 33,231,549 33,231,656
15 33,231,785 33,231,880
14 33,232,151 33,232,274
13 33,232,559 33,232,677
12 33,234,334 33,234,489
11 33,234,965 33,235,098
10 33,235,459 33,235,516
9 33,235,642 33,235,774
8 33,235,885 33,235,985
7 33,236,276 33,236,426
6 33,236,791 33,236,966
5 33,237,267 33,237,334
4 33,237,521 33,237,596
3 33,237,776 33,237,828
2 33,237,976 33,238,060
1 33,239,363 33,239,653
CDS
Exon number Type Start Stop
20 CDS 33,218,618 33,218,764
19 CDS 33,219,295 33,219,413
18 CDS 33,219,637 33,219,748
17 CDS 33,231,261 33,231,326
16 CDS 33,231,549 33,231,656
15 CDS 33,231,785 33,231,880
14 CDS 33,232,151 33,232,274
13 CDS 33,232,559 33,232,677
12 CDS 33,234,334 33,234,489
11 CDS 33,234,965 33,235,098
10 CDS 33,235,459 33,235,516
9 CDS 33,235,642 33,235,774
8 CDS 33,235,885 33,235,985
7 CDS 33,236,276 33,236,426
6 CDS 33,236,791 33,236,966
5 CDS 33,237,267 33,237,334
4 CDS 33,237,521 33,237,596
3 CDS 33,237,776 33,237,828
2 CDS 33,237,976 33,238,060
1 CDS 33,239,363 33,239,452
Other genome
Genome Chromosome Start End Links
hg38 chr6 33,250,278 33,271,876 Link
CDS sequence
ATGGCCGCCGCTGCGACCATGGCGGCTGCGGCCCGGGAACTGGTGTTGCGGGCTGGGACCTCAGATATGGAGGAGGAAGAGGGCCCGCTGGCGGGTGGTCCTGGGCTCCAGGAACCACTGCAACTTGGGGAGTTGGATATCACTTCTGATGAATTCATCCTGGATGAAGTGGATGTTCACATTCAGGCAAATCTGGAGGATGAGTTAGTAAAGGAAGCTCTTAAAACGGGTGTAGATCTCCGTCACTATTCAAAGCAAGTTGAGCTGGAGCTACAGCAGATTGAACAGAAATCCATTCGGGATTATATTCAAGAGAGTGAGAATATAGCATCTCTACACAACCAGATCACAGCCTGTGATGCTGTCCTGGAGCGAATGGAGCAGATGTTGGGAGCTTTTCAGAGTGACCTCAGCTCCATCAGCTCTGAGATCCGGACACTGCAGGAACAGTCAGGAGCCATGAACATTCGACTTCGAAATCGCCAGGCAGTTCGGGGGAAACTTGGGGAGCTTGTTGATGGTCTGGTGGTGCCTTCTGCTCTGGTCACGGCAATTCTGGAGGCTCCAGTGACAGAGCCCAGGTTCTTGGAGCAGCTACAGGAGCTGGATGCCAAGGCAGCCGCAGTCAGAGAGCAGGAAGCTAGAGGCACAGCAGCCTGCGCAGATGTCAGAGGCGTGCTCGATCGGCTCCGGGTCAAGGCAGTGACGAAGATCCGAGAGTTTATCCTCCAGAAGATTTATTCCTTCAGGAAACCCATGACCAACTATCAGATCCCCCAGACGGCCCTGCTGAAGTACAGGTTCTTCTATCAGTTTCTGCTGGGCAATGAACGAGCAACAGCAAAGGAGATCAGGGATGAATATGTGGAGACGCTGAGCAAGATTTACCTGTCTTACTACCGCTCTTACCTGGGGCGGCTCATGAAGGTGCAGTATGAGGAAGTCGCTGAGAAAGATGATCTAATGGGTGTGGAAGATACAGCAAAGAAAGGATTCTTCTCAAAGCCATCGCTCCGCAGCAGGAACACCATTTTCACCCTAGGAACCCGCGGCTCTGTCATCTCCCCCACTGAACTTGAGGCCCCCATCCTGGTGCCTCACACAGCGCAGCGCGGAGAGCAGAGGTATCCATTTGAGGCCCTCTTCCGCAGCCAGCACTACGCCCTCCTAGACAATTCCTGCCGCGAATACCTTTTCATCTGTGAATTTTTTGTTGTGTCTGGCCCAGCTGCACACGACCTGTTCCATGCTGTCATGGGCCGTACACTCAGCATGACCCTGAAACACCTGGATTCTTATCTAGCTGACTGCTACGATGCCATTGCTGTTTTTCTCTGTATCCACATTGTTCTCCGGTTCCGTAACATTGCAGCAAAGAGGGATGTTCCTGCCCTGGACAGGTACTGGGAACAGGTGCTTGCCTTGCTATGGCCACGGTTTGAACTGATCCTGGAGATGAATGTTCAGAGCGTCCGAAGCACTGACCCCCAGCGCCTAGGGGGGTTGGATACTCGGCCCCACTATATCACACGCCGCTATGCAGAGTTCTCCTCCGCTCTTGTCAGTATCAACCAGACAATTCCTAATGAACGGACCATGCAATTGCTGGGACAGCTGCAGGTGGAGGTGGAGAATTTTGTCCTCCGAGTGGCAGCTGAGTTCTCCTCAAGGAAGGAGCAGCTTGTGTTTCTGATCAACAACTATGACATGATGCTGGGTGTGCTGATGGAGCGGGCTGCAGATGACAGCAAAGAGGTTGAGAGCTTCCAGCAGCTGCTCAATGCTCGGACACAGGAATTCATTGAAGAGTTGCTGTCTCCCCCTTTTGGGGGTTTAGTGGCATTTGTGAAGGAGGCTGAGGCTTTGATTGAGCGTGGACAGGCTGAGCGACTTCGAGGGGAAGAAGCCCGGGTAACTCAGCTGATCCGTGGCTTTGGTAGTTCCTGGAAATCATCAGTGGAATCTCTGAGTCAGGATGTAATGCGGAGTTTCACCAACTTCAGAAATGGCACCAGTATCATTCAGGGAGCGCTGACCCAGCTGATCCAGCTCTATCATCGCTTCCACCGGGTGCTGTCCCAGCCGCAGCTCCGAGCCCTCCCTGCCCGGGCTGAGCTCATCAACATTCACCACCTTATGGTGGAGCTCAAGAAGCATAAGCCCAACTTCTGA
Amino sequence
MAAAATMAAAARELVLRAGTSDMEEEEGPLAGGPGLQEPLQLGELDITSDEFILDEVDVHIQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACDAVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSALVTAILEAPVTEPRFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIREFILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYYRSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGSVISPTELEAPILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFVVSGPAAHDLFHAVMGRTLSMTLKHLDSYLADCYDAIAVFLCIHIVLRFRNIAAKRDVPALDRYWEQVLALLWPRFELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTMQLLGQLQVEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEFIEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGSSWKSSVESLSQDVMRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLSQPQLRALPARAELINIHHLMVELKKHKPNF*