ENST00000360540.9 PCMTD1
Information
- Transcript ID
- ENST00000360540.9
- Genome
- hg19
- Position
- chr8:52,730,140-52,811,658
- Strand
- -
- CDS length
- 1,074
- Amino acid length
- 358
- Gene symbol
- PCMTD1
- Gene type
- protein-coding
- Gene description
- protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
- Gene Entrez Gene ID
- 115294
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 52,730,140 | 52,733,278 |
| 6 | 52,744,004 | 52,744,127 |
| 5 | 52,746,078 | 52,746,249 |
| 4 | 52,758,221 | 52,758,323 |
| 3 | 52,773,405 | 52,773,806 |
| 2 | 52,782,808 | 52,782,950 |
| 1 | 52,811,490 | 52,811,658 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 52,732,911 | 52,733,278 |
| 6 | CDS | 52,744,004 | 52,744,127 |
| 5 | CDS | 52,746,078 | 52,746,249 |
| 4 | CDS | 52,758,221 | 52,758,323 |
| 3 | CDS | 52,773,405 | 52,773,711 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr8 | 51,817,580 | 51,899,098 | Link |
CDS sequence
ATGGGAGGAGCTGTGAGTGCTGGGGAAGATAATGATGACTTAATTGATAATTTAAAAGAAGCTCAGTATATTCGTACTGAAAGAGTGGAGCAAGCCTTCAGAGCGATTGATCGTGGAGATTACTATTTGGAAGGCTACAGAGACAATGCTTACAAAGACTTAGCCTGGAAGCATGGAAACATCCACTTGTCAGCACCTTGCATTTATTCTGAAGTTATGGAAGCATTGAAACTTCAACCAGGATTGTCTTTTCTTAACCTGGGAAGTGGAACCGGATATTTAAGTACAATGGTGGGCTTAATTTTAGGTCCTTTTGGAATAAATCATGGGATTGAGCTTCATTCAGATGTGGTGGAATATGCCAAGGAAAAACTGGAGAGCTTCATCAAAAATAGTGATAGCTTTGATAAATTTGAGTTCTGTGAACCTGCATTTGTTGTTGGTAATTGCCTCCAGATAGCTTCTGACAGTCATCAGTATGATCGAATTTATTGTGGAGCTGGAGTGCAGAAAGACCATGAAAACTACATGAAAATATTACTAAAAGTTGGAGGCATATTAGTCATGCCTATAGAGGATCAGTTAACACAGATTATGCGAACTGGACAGAACACTTGGGAAAGTAAAAATATCCTTGCTGTTTCATTTGCTCCACTTGTGCAACCAAGTAAGAATGATAATGGCAAACCAGATTCTGTGGGACTCCCTCCCTGTGCTGTCAGGAATCTACAGGACTTGGCTCGTATTTACATTCGACGCACACTTAGAAATTTCATAAATGATGAGATGCAGGCCAAGGGGATTCCTCAAAGGGCTCCACCCAAAAGGAAAAGAAAGAGAGTTAAACAGAGAATTAACACTTACGTATTTGTGGGTAATCAGCTTATTCCTCAGCCTCTAGACAGTGAAGAGGATGAAAAAATGGAAGAGGATAACAAAGAAGAGGAGGAAAAAGATCACAATGAAGCAATGAAGCCAGAGGAGCCACCTCAAAATTTACTGAGAGAAAAAATCATGAAGCTGCCCCTCCCTGAATCTTTAAAAGCTTACTTGACATATTTTAGAGACAAATAA
Amino sequence
MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHNEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFRDK*