ENST00000360540.9 PCMTD1
Information
- Transcript ID
- ENST00000360540.9
- Genome
- hg38
- Position
- chr8:51,817,580-51,899,098
- Strand
- -
- CDS length
- 1,074
- Amino acid length
- 358
- Gene symbol
- PCMTD1
- Gene type
- protein-coding
- Gene description
- protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
- Gene Entrez Gene ID
- 115294
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 7 | 51,817,580 | 51,820,718 |
| 6 | 51,831,444 | 51,831,567 |
| 5 | 51,833,518 | 51,833,689 |
| 4 | 51,845,661 | 51,845,763 |
| 3 | 51,860,845 | 51,861,246 |
| 2 | 51,870,248 | 51,870,390 |
| 1 | 51,898,930 | 51,899,098 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 7 | CDS | 51,820,351 | 51,820,718 |
| 6 | CDS | 51,831,444 | 51,831,567 |
| 5 | CDS | 51,833,518 | 51,833,689 |
| 4 | CDS | 51,845,661 | 51,845,763 |
| 3 | CDS | 51,860,845 | 51,861,151 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg19 | chr8 | 52,730,140 | 52,811,658 | Link |
CDS sequence
ATGGGAGGAGCTGTGAGTGCTGGGGAAGATAATGATGACTTAATTGATAATTTAAAAGAAGCTCAGTATATTCGTACTGAAAGAGTGGAGCAAGCCTTCAGAGCGATTGATCGTGGAGATTACTATTTGGAAGGCTACAGAGACAATGCTTACAAAGACTTAGCCTGGAAGCATGGAAACATCCACTTGTCAGCACCTTGCATTTATTCTGAAGTTATGGAAGCATTGAAACTTCAACCAGGATTGTCTTTTCTTAACCTGGGAAGTGGAACCGGATATTTAAGTACAATGGTGGGCTTAATTTTAGGTCCTTTTGGAATAAATCATGGGATTGAGCTTCATTCAGATGTGGTGGAATATGCCAAGGAAAAACTGGAGAGCTTCATCAAAAATAGTGATAGCTTTGATAAATTTGAGTTCTGTGAACCTGCATTTGTTGTTGGTAATTGCCTCCAGATAGCTTCTGACAGTCATCAGTATGATCGAATTTATTGTGGAGCTGGAGTGCAGAAAGACCATGAAAACTACATGAAAATATTACTAAAAGTTGGAGGCATATTAGTCATGCCTATAGAGGATCAGTTAACACAGATTATGCGAACTGGACAGAACACTTGGGAAAGTAAAAATATCCTTGCTGTTTCATTTGCTCCACTTGTGCAACCAAGTAAGAATGATAATGGCAAACCAGATTCTGTGGGACTCCCTCCCTGTGCTGTCAGGAATCTACAGGACTTGGCTCGTATTTACATTCGACGCACACTTAGAAATTTCATAAATGATGAGATGCAGGCCAAGGGGATTCCTCAAAGGGCTCCACCCAAAAGGAAAAGAAAGAGAGTTAAACAGAGAATTAACACTTACGTATTTGTGGGTAATCAGCTTATTCCTCAGCCTCTAGACAGTGAAGAGGATGAAAAAATGGAAGAGGATAACAAAGAAGAGGAGGAAAAAGATCACAATGAAGCAATGAAGCCAGAGGAGCCACCTCAAAATTTACTGAGAGAAAAAATCATGAAGCTGCCCCTCCCTGAATCTTTAAAAGCTTACTTGACATATTTTAGAGACAAATAA
Amino sequence
MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDNKEEEEKDHNEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFRDK*