ENST00000597347.5 SOX2-OT

Information
Transcript ID
ENST00000597347.5
Genome
hg38
Position
chr3:181,174,890-181,700,044
Strand
+
CDS length
0
Amino acid length
0
Gene symbol
SOX2-OT
Gene type
ncRNA
Gene description
SOX2 overlapping transcript
Gene Entrez Gene ID
347689
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 181,174,890 181,175,267
2 181,175,514 181,175,583
3 181,563,720 181,563,928
4 181,610,861 181,610,929
5 181,690,834 181,691,002
6 181,699,598 181,700,044
Other genome
Genome Chromosome Start End Links
hg19 chr3 180,892,678 181,417,832 Link
CDS sequence
Amino sequence