ENST00000648843.3 CABCOCO1

Information
Transcript ID
ENST00000648843.3
Genome
hg19
Position
chr10:63,422,687-63,526,524
Strand
+
CDS length
891
Amino acid length
297
Gene symbol
CABCOCO1
Gene type
protein-coding
Gene description
ciliary associated calcium binding coiled-coil 1
Gene Entrez Gene ID
219621
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 63,422,687 63,422,790
2 63,432,390 63,432,493
3 63,440,901 63,441,070
4 63,445,799 63,445,943
5 63,450,307 63,450,379
6 63,519,817 63,519,939
7 63,520,621 63,520,761
8 63,525,697 63,526,524
CDS
Exon number Type Start Stop
1 CDS 63,422,731 63,422,790
2 CDS 63,432,390 63,432,493
3 CDS 63,440,901 63,441,070
4 CDS 63,445,799 63,445,943
5 CDS 63,450,307 63,450,379
6 CDS 63,519,817 63,519,939
7 CDS 63,520,621 63,520,761
8 CDS 63,525,697 63,525,771
Other genome
Genome Chromosome Start End Links
hg38 chr10 61,662,929 61,766,766 Link
CDS sequence
ATGTCGCAGGGGACGACTCCCTGGGGGCCGACCCCGGCGGGAACCACGCCCGAATCGGAGAGAGACACTGAATTCCAGGAGCATGAAAAGATTCTGTCTCCGGATTTTCTTTCAGTTGCCCAAATCACTGATTTGTTAATGGAGGACATCGATGGAGTTCAAGAAAAACTGAGAATATTTTTGAATTTCAAAAACCTTGAAACTTGTTTAAAGGATGCCATTCTACTAGATTATTATGTATCTGGATTTTTGTGGGCTAGAGGAATGGATTTCTCTATTATTCAGTATTCAAAATTTATGACTTTACTAGCTATGTCACTTCAAAATCTTAAAACACTACATATGTCCTTAGAGGAAAGCATAAAATGGCTTGGAGAAGTTATGGCTGAAATAGGACCAACACATTCGCAAAAGAGTGAGGACTGGAATATCTTTGATGTAAAACAAGCCAATGCTATCATTGATTACTTAAAAATCAGCTTATTTCAACACTACAAGCTATACGAGTTTATGTTCTACTCTGCCAGGGAAGAAATTGTGATAGGAACTGAGCAAGTGATAGAGGTTGTCAAGTCTGCATGTGGCCCTTTCCCAAATCCTCTGGAAGAAGGAATCTCATTTGATATTTATTCAACATTCATAGAGCCCCCCACAATATTGGATACGGAAATGAAGAGGTTGGATCAAGAACAAGGCCCTGAGGAGTCTCAGCCAGAAACTGACACCTCAGACATGGATCCTTTAGTTGGTTTTACCATTGAAGATGTAAAATCAGTGCTGGATCAAGTCACAGATGACATTTTAATCGGCATTCAGACCGAGATAAACGAAAAACTGCAAATACAGGAAGAGGCCTTTAATGCACGAATAGAAAAATTGAAAAAGGCCTAA
Amino sequence
MSQGTTPWGPTPAGTTPESERDTEFQEHEKILSPDFLSVAQITDLLMEDIDGVQEKLRIFLNFKNLETCLKDAILLDYYVSGFLWARGMDFSIIQYSKFMTLLAMSLQNLKTLHMSLEESIKWLGEVMAEIGPTHSQKSEDWNIFDVKQANAIIDYLKISLFQHYKLYEFMFYSAREEIVIGTEQVIEVVKSACGPFPNPLEEGISFDIYSTFIEPPTILDTEMKRLDQEQGPEESQPETDTSDMDPLVGFTIEDVKSVLDQVTDDILIGIQTEINEKLQIQEEAFNARIEKLKKA*