ENST00000648843.3 CABCOCO1

Information
Transcript ID
ENST00000648843.3
Genome
hg38
Position
chr10:61,662,929-61,766,766
Strand
+
CDS length
891
Amino acid length
297
Gene symbol
CABCOCO1
Gene type
protein-coding
Gene description
ciliary associated calcium binding coiled-coil 1
Gene Entrez Gene ID
219621
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 61,662,929 61,663,032
2 61,672,632 61,672,735
3 61,681,143 61,681,312
4 61,686,041 61,686,185
5 61,690,549 61,690,621
6 61,760,059 61,760,181
7 61,760,863 61,761,003
8 61,765,939 61,766,766
CDS
Exon number Type Start Stop
1 CDS 61,662,973 61,663,032
2 CDS 61,672,632 61,672,735
3 CDS 61,681,143 61,681,312
4 CDS 61,686,041 61,686,185
5 CDS 61,690,549 61,690,621
6 CDS 61,760,059 61,760,181
7 CDS 61,760,863 61,761,003
8 CDS 61,765,939 61,766,013
Other genome
Genome Chromosome Start End Links
hg19 chr10 63,422,687 63,526,524 Link
CDS sequence
ATGTCGCAGGGGACGACTCCCTGGGGGCCGACCCCGGCGGGAACCACGCCCGAATCGGAGAGAGACACTGAATTCCAGGAGCATGAAAAGATTCTGTCTCCGGATTTTCTTTCAGTTGCCCAAATCACTGATTTGTTAATGGAGGACATCGATGGAGTTCAAGAAAAACTGAGAATATTTTTGAATTTCAAAAACCTTGAAACTTGTTTAAAGGATGCCATTCTACTAGATTATTATGTATCTGGATTTTTGTGGGCTAGAGGAATGGATTTCTCTATTATTCAGTATTCAAAATTTATGACTTTACTAGCTATGTCACTTCAAAATCTTAAAACACTACATATGTCCTTAGAGGAAAGCATAAAATGGCTTGGAGAAGTTATGGCTGAAATAGGACCAACACATTCGCAAAAGAGTGAGGACTGGAATATCTTTGATGTAAAACAAGCCAATGCTATCATTGATTACTTAAAAATCAGCTTATTTCAACACTACAAGCTATACGAGTTTATGTTCTACTCTGCCAGGGAAGAAATTGTGATAGGAACTGAGCAAGTGATAGAGGTTGTCAAGTCTGCATGTGGCCCTTTCCCAAATCCTCTGGAAGAAGGAATCTCATTTGATATTTATTCAACATTCATAGAGCCCCCCACAATATTGGATACGGAAATGAAGAGGTTGGATCAAGAACAAGGCCCTGAGGAGTCTCAGCCAGAAACTGACACCTCAGACATGGATCCTTTAGTTGGTTTTACCATTGAAGATGTAAAATCAGTGCTGGATCAAGTCACAGATGACATTTTAATCGGCATTCAGACCGAGATAAACGAAAAACTGCAAATACAGGAAGAGGCCTTTAATGCACGAATAGAAAAATTGAAAAAGGCCTAA
Amino sequence
MSQGTTPWGPTPAGTTPESERDTEFQEHEKILSPDFLSVAQITDLLMEDIDGVQEKLRIFLNFKNLETCLKDAILLDYYVSGFLWARGMDFSIIQYSKFMTLLAMSLQNLKTLHMSLEESIKWLGEVMAEIGPTHSQKSEDWNIFDVKQANAIIDYLKISLFQHYKLYEFMFYSAREEIVIGTEQVIEVVKSACGPFPNPLEEGISFDIYSTFIEPPTILDTEMKRLDQEQGPEESQPETDTSDMDPLVGFTIEDVKSVLDQVTDDILIGIQTEINEKLQIQEEAFNARIEKLKKA*