ENST00000530356.5 SNX19

Information
Transcript ID
ENST00000530356.5
Genome
hg19
Position
chr11:130,748,288-130,786,346
Strand
-
CDS length
1,119
Amino acid length
373
Gene symbol
SNX19
Gene type
protein-coding
Gene description
sorting nexin 19
Gene Entrez Gene ID
399979
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
12 130,748,288 130,748,449
11 130,749,519 130,749,606
10 130,750,517 130,750,701
9 130,773,150 130,773,279
8 130,775,848 130,776,028
7 130,776,520 130,776,616
6 130,777,848 130,777,978
5 130,779,913 130,780,032
4 130,780,165 130,780,265
3 130,781,528 130,781,666
2 130,784,589 130,784,644
1 130,786,175 130,786,346
CDS
Exon number Type Start Stop
12 CDS 130,748,317 130,748,449
11 CDS 130,749,519 130,749,606
10 CDS 130,750,517 130,750,701
9 CDS 130,773,150 130,773,279
8 CDS 130,775,848 130,776,028
7 CDS 130,776,520 130,776,616
6 CDS 130,777,848 130,777,978
5 CDS 130,779,913 130,780,032
4 CDS 130,780,165 130,780,218
Other genome
Genome Chromosome Start End Links
hg38 chr11 130,878,393 130,916,451 Link
CDS sequence
ATGGACAGTGACAGAGTAGAAGCCCGTAAGAGCCTCCTAGAATCATTCCTAAAGCAACTCTGTGCCATTCCGGAGATCGCTAACAGTGAGGAGGTGCAGGAGTTCCTTGCTCTGAACACAGATGCTCGTATTGCCTTTGTCAAGAAACCATTTATGGTCTCTAGAATAGACAAGATGGTGGTGAGTGCCATTGTGGACACCTTGAAGACAGCGTTTCCTCGCTCTGAACCCCAGAGCCCCACAGAGGAGCTGAGTGAGGCCGAGACCGAAAGCAAGCCCCAGACAGAAGGCAAGAAGGCTAGCAAGTCTAGGCTGAGGTTCTCATCCAGTAAAATTTCTCCAGCACTAAGTGTGACTGAAGCACAAGACAAGATTCTTTATTGTCTCCAGGAAGGCAATGTGGAGTCTGAGACTCTATCCATGTCTGCGATGGAATCTTTTATTGAAAAACAGACAAAGTTACTGGAAATGCAGCCAACAAAAGCCCCAGAAAAAGATCCTGAACAACCTCCCAAAGGACGTGTGGACAGTTGCGTGTCAGATGCAGCCGTGCCAGCCCAAGACCCCAGCAACAGCGATCCAGGAACAGAGACAGAGTTAGCTGACACAGCCCTGGATCTGCTCCTCTTGCTACTAACAGAACAGTGGAAATGGCTATGTACCGAAAACATGCAAAAGTTTCTTCGTCTTATCTTTGGGACCCTAGTTCAAAGGTGGCTAGAGGTGCAGGTAGCTAATTTAACAAGTCCACAGCGCTGGGTGCAGTACCTCCTGCTTCTTCAGGAGTCCATCTGGCCTGGTGGAGTTTTGCCTAAGTTTCCACGGCCCGTAAGGACCCAAGAGCAGAAACTGGCTGCTGAGAAACAGGCTTTGCAGAGCCTGATGGGAGTCCTCCCAGATCTCGTAGTAGAAATTCTTGGGGTGAACAAATGCCGGCTGAGCTGGGGTCTAGTCCTGGAGTCACTACAACAACCCCTCATCAACAGGCATTTGATTTACTGCCTTGGGGACATCATCCTGGAATTCTTGGATCTCAGTGCCTCTGTTGAGGAGTCTGCTGCTACCACCTCTGCCTCAGATACCCCAGGCAACTCTAAGAGGATGGGTGTCTCCTCTTAG
Amino sequence
MDSDRVEARKSLLESFLKQLCAIPEIANSEEVQEFLALNTDARIAFVKKPFMVSRIDKMVVSAIVDTLKTAFPRSEPQSPTEELSEAETESKPQTEGKKASKSRLRFSSSKISPALSVTEAQDKILYCLQEGNVESETLSMSAMESFIEKQTKLLEMQPTKAPEKDPEQPPKGRVDSCVSDAAVPAQDPSNSDPGTETELADTALDLLLLLLTEQWKWLCTENMQKFLRLIFGTLVQRWLEVQVANLTSPQRWVQYLLLLQESIWPGGVLPKFPRPVRTQEQKLAAEKQALQSLMGVLPDLVVEILGVNKCRLSWGLVLESLQQPLINRHLIYCLGDIILEFLDLSASVEESAATTSASDTPGNSKRMGVSS*