ENST00000369367.8 SCAF11

Information
Transcript ID
ENST00000369367.8
Genome
hg19
Position
chr12:46,312,914-46,384,357
Strand
-
CDS length
4,392
Amino acid length
1,464
Gene symbol
SCAF11
Gene type
protein-coding
Gene description
SR-related CTD associated factor 11
Gene Entrez Gene ID
9169
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
15 46,312,914 46,315,977
14 46,316,246 46,316,365
13 46,316,719 46,316,937
12 46,318,511 46,318,857
11 46,319,925 46,322,642
10 46,325,289 46,325,395
9 46,326,914 46,327,015
8 46,327,959 46,328,068
7 46,328,230 46,328,288
6 46,339,032 46,339,096
5 46,342,220 46,342,320
4 46,345,433 46,345,510
3 46,355,483 46,355,640
2 46,357,890 46,357,971
1 46,384,136 46,384,357
CDS
Exon number Type Start Stop
15 CDS 46,315,831 46,315,977
14 CDS 46,316,246 46,316,365
13 CDS 46,316,719 46,316,937
12 CDS 46,318,511 46,318,857
11 CDS 46,319,925 46,322,642
10 CDS 46,325,289 46,325,395
9 CDS 46,326,914 46,327,015
8 CDS 46,327,959 46,328,068
7 CDS 46,328,230 46,328,288
6 CDS 46,339,032 46,339,096
5 CDS 46,342,220 46,342,320
4 CDS 46,345,433 46,345,510
3 CDS 46,355,483 46,355,640
2 CDS 46,357,890 46,357,950
Other genome
Genome Chromosome Start End Links
hg38 chr12 45,919,131 45,990,574 Link
CDS sequence
ATGAAGAAGAAAACTGTATGTACCCTAAATATGGGAGATAAGAAGTATGAAGACATGGAAGGTGAAGAAAACGGAGATAATACTATTTCCACTGGTCTGTTGTACAGTGAGGCTGACAGATGCCCAATATGTCTTAATTGTCTATTAGAAAAGGAAGTTGGTTTTCCAGAAAGCTGTAATCATGTCTTCTGTATGACTTGTATTCTTAAATGGGCAGAGACACTGGCTTCATGTCCTATTGACCGTAAACCTTTTCAGGCAGTGTTTAAATTCAGTGCATTGGAAGGTTATGTTAAGGTTCAAGTAAAAAAACAGCTGAGAGAAACAAAAGACAAGAAAAATGAAAACTCATTTGAGAAACAGGTCTCCTGTCATGAAAATTCTAAAAGCTGTATAAGAAGAAAAGCCATCGTAAGAGAAGATCTATTAAGTGCAAAAGTTTGTGACTTGAAGTGGATACATAGAAACTCTTTATACAGTGAAACAGGAGGAAAGAAAAATGCAGCAATAAAGATAAATAAGCCTCAGAGATCAAATTGGAGTACAAATCAGTGCTTCAGAAATTTTTTCTCCAATATGTTTTCTTCTGTTAGCCACTCTGGAGAATCTTCCTTTACCTATAGAGCTTATTGTACAGAATTTATAGAAGCCAGTGAAATCAGTGCATTGATTAGGCAGAAGAGACATGAACTGGAATTGTCATGGTTTCCTGATACATTACCTGGAATTGGAAGAATTGGTTTTATACCCTGGAATGTTGAAACAGAAGTCCTTCCTCTCATTTCTTCTGTGTTGCCAAGAACTATTTTTCCAACAAGTACCATATCTTTCGAACATTTTGGTACTTCTTGCAAGGGATATGCATTAGCACATACTCAAGAAGGGGAAGAAAAGAAGCAAACTTCTGGTACATCAAATACCAGAGGATCAAGACGAAAACCTGCAATGACAACTCCTACAAGGAGGTCTACACGTAACACAAGAGCTGAAACAGCCAGTCAGTCTCAGAGATCCCCAATATCAGACAATTCTGGGTGTGATGCCCCAGGTAACAGTAATCCATCTTTAAGTGTTCCCTCTTCAGCTGAGTCAGAAAAGCAAACAAGACAGGCTCCAAAACGGAAGTCTGTAAGAAGAGGAAGAAAACCACCTTTACTGAAAAAGAAACTTCGGAGCTCTGTAGCTGCCCCTGAAAAATCATCTTCCAATGATTCAGTAGATGAAGAAACAGCAGAATCTGACACATCACCTGTGTTAGAAAAAGAGCACCAACCAGATGTAGACAGTAGTAACATTTGTACTGTGCAGACTCATGTAGAAAACCAGTCTGCTAATTGCTTGAAAAGTTGCAATGAGCAAATAGAAGAAAGTGAGAAGCATACTGCAAATTATGATACAGAGGAAAGAGTAGGATCTTCATCTTCTGAGTCTTGTGCTCAAGATCTTCCTGTGCTAGTTGGTGAGGAAGGGGAAGTTAAAAAACTCGAGAATACAGGTATAGAGGCTAATGTTTTGTGTTTGGAAAGTGAGATTTCTGAAAATATTCTTGAAAAAGGAGGTGATCCATTGGAAAAGCAAGACCAGATATCTGGACTTTCACAATCAGAGGTAAAGACAGATGTATGTACAGTTCATCTTCCAAATGATTTTCCTACATGTTTAACATCTGAAAGCAAAGTGTACCAACCTGTATCTTGTCCCCTAAGTGACTTATCTGAGAATGTAGAGTCAGTGGTTAATGAAGAAAAAATAACAGAGAGTTCCCTAGTAGAAATTACTGAACATAAAGATTTTACACTAAAAACAGAGGAGCTTATAGAGAGCCCCAAGTTAGAATCTTCTGAGGGTGAAATTATACAGACAGTGGACAGACAATCTGTTAAGAGCCCAGAGGTTCAATTGCTTGGGCATGTTGAAACTGAAGATGTAGAAATAATTGCAACATGTGATACTTTTGGGAATGAAGATTTCAATAATATTCAAGACTCTGAAAATAACTTACTAAAAAATAATCTTCTGAACACCAAATTGGAAAAATCTTTAGAAGAAAAGAATGAATCGCTGACCGAACATCCTAGATCTACAGAGTTGCCTAAAACACACATTGAACAGATTCAGAAGCATTTTAGTGAGGACAACAATGAAATGATACCTATGGAGTGTGATTCATTTTGCAGTGACCAAAATGAATCTGAAGTTGAACCATCTGTAAATGCTGATCTTAAACAAATGAATGAAAATTCTGTGACACACTGTTCTGAAAATAATATGCCGTCTTCTGATCTTGCGGATGAAAAGGTTGAAACTGTTTCTCAACCATCTGAAAGCCCAAAAGATACCATAGATAAAACCAAAAAGCCTCGTACTCGAAGATCTAGATTTCATTCTCCATCTACAACTTGGTCACCCAACAAAGACACTCCACAAGAAAAGAAGCGGCCCCAGTCTCCATCTCCCAGAAGAGAAACTGGGAAAGAAAGCAGGAAGTCTCAATCACCATCTCCTAAGAATGAGTCAGCCAGAGGCCGGAAAAAATCCCGTTCTCAGTCCCCAAAAAAGGATATTGCAAGAGAAAGGAGGCAATCTCAGTCTCGGTCTCCAAAAAGGGATACTACTAGGGAAAGCAGAAGATCTGAATCACTGTCCCCAAGAAGAGAAACTTCTAGAGAGAACAAAAGATCTCAGCCAAGAGTGAAAGATTCTTCCCCAGGAGAAAAATCCAGGTCCCAGAGCAGAGAACGAGAAAGTGATAGAGATGGGCAGAGGAGAGAGAGAGAAAGGAGAACCAGAAAGTGGTCTAGGTCCAGATCTCATTCTAGGTCCCCCTCAAGATGTAGAACAAAAAGTAAGAGTTCATCATTTGGTAGAATTGACAGAGATAGTTACTCTCCCCGGTGGAAGGGAAGATGGGCAAATGATGGTTGGAGATGTCCACGAGGAAATGATCGGTACAGAAAGAATGACCCAGAGAAACAGAATGAAAATACAAGAAAAGAAAAAAATGACATCCATCTAGATGCTGATGATCCAAATTCTGCTGACAAACATAGAAATGACTGTCCCAATTGGATAACAGAAAAAATAAACTCTGGGCCTGATCCAAGAACCAGAAATCCAGAAAAGTTGAAAGAGTCTCATTGGGAAGAAAATAGAAATGAAAATTCAGGAAATTCTTGGAATAAAAACTTTGGTTCTGGTTGGGTATCTAACCGTGGTAGAGGCAGAGGCAACCGTGGCAGAGGCACTTACAGAAGTAGTTTTGCCTATAAAGATCAGAATGAAAATCGGTGGCAAAATCGAAAACCCCTCTCAGGGAATTCAAACAGTTCAGGGAGTGAATCTTTCAAGTTTGTGGAACAGCAATCCTATAAGCGAAAAAGTGAACAGGAGTTCTCATTTGATACACCAGCAGATAGATCTGGATGGACATCTGCATCCAGCTGGGCCGTGAGAAAGACTTTGCCAGCAGATGTACAAAACTACTACTCACGACGAGGCAGAAATTCTTCAGGTCCACAGTCTGGATGGATGAAACAAGAGGAGGAAACATCTGGACAGGATTCTAGCCTAAAAGACCAAACAAACCAGCAAGTTGATGGTTCTCAGCTACCTATAAATATGATGCAACCGCAAATGAATGTAATGCAGCAACAAATGAATGCACAACACCAGCCTATGAATATCTTCCCATATCCAGTGGGTGTTCATGCTCCTTTGATGAACATCCAACGCAATCCATTTAACATTCATCCTCAGCTACCCTTGCATCTCCACACAGGAGTGCCCCTCATGCAGGTAGCCACTCCTACCAGTGTATCTCAGGGACTACCACCACCACCACCCCCTCCCCCACCATCCCAACAAGTCAACTACATTGCTTCACAACCAGATGGAAAGCAATTGCAGGGTATTCCTAGTTCTTCTCATGTAAGTAATAACATGAGTACACCAGTTTTGCCTGCTCCGACAGCAGCCCCAGGAAATACGGGAATGGTTCAGGGACCAAGTTCTGGTAATACTTCGTCATCAAGTCACAGCAAAGCCTCTAATGCTGCTGTAAAATTGGCAGAAAGCAAAGTAAGTGTTGCAGTGGAAGCCAGCGCAGATAGCTCGAAGACAGACAAGAAATTGCAAATTCAAGAAAAAGCAGCACAAGAGGTAAAATTGGCCATCAAGCCATTTTACCAAAATAAAGATATCACCAAGGAAGAATATAAAGAAATTGTACGGAAAGCAGTAGATAAAGTTTGTCATAGTAAGAGTGGAGAAGTAAATTCTACTAAAGTGGCAAATCTGGTTAAAGCCTATGTAGACAAATACAAATATTCACGGAAGGGGAGCCAAAAGAAAACTCTGGAAGAACCTGTGTCTACTGAAAAAAACATAGGCTGA
Amino sequence
MKKKTVCTLNMGDKKYEDMEGEENGDNTISTGLLYSEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAETLASCPIDRKPFQAVFKFSALEGYVKVQVKKQLRETKDKKNENSFEKQVSCHENSKSCIRRKAIVREDLLSAKVCDLKWIHRNSLYSETGGKKNAAIKINKPQRSNWSTNQCFRNFFSNMFSSVSHSGESSFTYRAYCTEFIEASEISALIRQKRHELELSWFPDTLPGIGRIGFIPWNVETEVLPLISSVLPRTIFPTSTISFEHFGTSCKGYALAHTQEGEEKKQTSGTSNTRGSRRKPAMTTPTRRSTRNTRAETASQSQRSPISDNSGCDAPGNSNPSLSVPSSAESEKQTRQAPKRKSVRRGRKPPLLKKKLRSSVAAPEKSSSNDSVDEETAESDTSPVLEKEHQPDVDSSNICTVQTHVENQSANCLKSCNEQIEESEKHTANYDTEERVGSSSSESCAQDLPVLVGEEGEVKKLENTGIEANVLCLESEISENILEKGGDPLEKQDQISGLSQSEVKTDVCTVHLPNDFPTCLTSESKVYQPVSCPLSDLSENVESVVNEEKITESSLVEITEHKDFTLKTEELIESPKLESSEGEIIQTVDRQSVKSPEVQLLGHVETEDVEIIATCDTFGNEDFNNIQDSENNLLKNNLLNTKLEKSLEEKNESLTEHPRSTELPKTHIEQIQKHFSEDNNEMIPMECDSFCSDQNESEVEPSVNADLKQMNENSVTHCSENNMPSSDLADEKVETVSQPSESPKDTIDKTKKPRTRRSRFHSPSTTWSPNKDTPQEKKRPQSPSPRRETGKESRKSQSPSPKNESARGRKKSRSQSPKKDIARERRQSQSRSPKRDTTRESRRSESLSPRRETSRENKRSQPRVKDSSPGEKSRSQSRERESDRDGQRRERERRTRKWSRSRSHSRSPSRCRTKSKSSSFGRIDRDSYSPRWKGRWANDGWRCPRGNDRYRKNDPEKQNENTRKEKNDIHLDADDPNSADKHRNDCPNWITEKINSGPDPRTRNPEKLKESHWEENRNENSGNSWNKNFGSGWVSNRGRGRGNRGRGTYRSSFAYKDQNENRWQNRKPLSGNSNSSGSESFKFVEQQSYKRKSEQEFSFDTPADRSGWTSASSWAVRKTLPADVQNYYSRRGRNSSGPQSGWMKQEEETSGQDSSLKDQTNQQVDGSQLPINMMQPQMNVMQQQMNAQHQPMNIFPYPVGVHAPLMNIQRNPFNIHPQLPLHLHTGVPLMQVATPTSVSQGLPPPPPPPPPSQQVNYIASQPDGKQLQGIPSSSHVSNNMSTPVLPAPTAAPGNTGMVQGPSSGNTSSSSHSKASNAAVKLAESKVSVAVEASADSSKTDKKLQIQEKAAQEVKLAIKPFYQNKDITKEEYKEIVRKAVDKVCHSKSGEVNSTKVANLVKAYVDKYKYSRKGSQKKTLEEPVSTEKNIG*