ENST00000369367.8 SCAF11

Information
Transcript ID
ENST00000369367.8
Genome
hg38
Position
chr12:45,919,131-45,990,574
Strand
-
CDS length
4,392
Amino acid length
1,464
Gene symbol
SCAF11
Gene type
protein-coding
Gene description
SR-related CTD associated factor 11
Gene Entrez Gene ID
9169
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
15 45,919,131 45,922,194
14 45,922,463 45,922,582
13 45,922,936 45,923,154
12 45,924,728 45,925,074
11 45,926,142 45,928,859
10 45,931,506 45,931,612
9 45,933,131 45,933,232
8 45,934,176 45,934,285
7 45,934,447 45,934,505
6 45,945,249 45,945,313
5 45,948,437 45,948,537
4 45,951,650 45,951,727
3 45,961,700 45,961,857
2 45,964,107 45,964,188
1 45,990,353 45,990,574
CDS
Exon number Type Start Stop
15 CDS 45,922,048 45,922,194
14 CDS 45,922,463 45,922,582
13 CDS 45,922,936 45,923,154
12 CDS 45,924,728 45,925,074
11 CDS 45,926,142 45,928,859
10 CDS 45,931,506 45,931,612
9 CDS 45,933,131 45,933,232
8 CDS 45,934,176 45,934,285
7 CDS 45,934,447 45,934,505
6 CDS 45,945,249 45,945,313
5 CDS 45,948,437 45,948,537
4 CDS 45,951,650 45,951,727
3 CDS 45,961,700 45,961,857
2 CDS 45,964,107 45,964,167
Other genome
Genome Chromosome Start End Links
hg19 chr12 46,312,914 46,384,357 Link
CDS sequence
ATGAAGAAGAAAACTGTATGTACCCTAAATATGGGAGATAAGAAGTATGAAGACATGGAAGGTGAAGAAAACGGAGATAATACTATTTCCACTGGTCTGTTGTACAGTGAGGCTGACAGATGCCCAATATGTCTTAATTGTCTATTAGAAAAGGAAGTTGGTTTTCCAGAAAGCTGTAATCATGTCTTCTGTATGACTTGTATTCTTAAATGGGCAGAGACACTGGCTTCATGTCCTATTGACCGTAAACCTTTTCAGGCAGTGTTTAAATTCAGTGCATTGGAAGGTTATGTTAAGGTTCAAGTAAAAAAACAGCTGAGAGAAACAAAAGACAAGAAAAATGAAAACTCATTTGAGAAACAGGTCTCCTGTCATGAAAATTCTAAAAGCTGTATAAGAAGAAAAGCCATCGTAAGAGAAGATCTATTAAGTGCAAAAGTTTGTGACTTGAAGTGGATACATAGAAACTCTTTATACAGTGAAACAGGAGGAAAGAAAAATGCAGCAATAAAGATAAATAAGCCTCAGAGATCAAATTGGAGTACAAATCAGTGCTTCAGAAATTTTTTCTCCAATATGTTTTCTTCTGTTAGCCACTCTGGAGAATCTTCCTTTACCTATAGAGCTTATTGTACAGAATTTATAGAAGCCAGTGAAATCAGTGCATTGATTAGGCAGAAGAGACATGAACTGGAATTGTCATGGTTTCCTGATACATTACCTGGAATTGGAAGAATTGGTTTTATACCCTGGAATGTTGAAACAGAAGTCCTTCCTCTCATTTCTTCTGTGTTGCCAAGAACTATTTTTCCAACAAGTACCATATCTTTCGAACATTTTGGTACTTCTTGCAAGGGATATGCATTAGCACATACTCAAGAAGGGGAAGAAAAGAAGCAAACTTCTGGTACATCAAATACCAGAGGATCAAGACGAAAACCTGCAATGACAACTCCTACAAGGAGGTCTACACGTAACACAAGAGCTGAAACAGCCAGTCAGTCTCAGAGATCCCCAATATCAGACAATTCTGGGTGTGATGCCCCAGGTAACAGTAATCCATCTTTAAGTGTTCCCTCTTCAGCTGAGTCAGAAAAGCAAACAAGACAGGCTCCAAAACGGAAGTCTGTAAGAAGAGGAAGAAAACCACCTTTACTGAAAAAGAAACTTCGGAGCTCTGTAGCTGCCCCTGAAAAATCATCTTCCAATGATTCAGTAGATGAAGAAACAGCAGAATCTGACACATCACCTGTGTTAGAAAAAGAGCACCAACCAGATGTAGACAGTAGTAACATTTGTACTGTGCAGACTCATGTAGAAAACCAGTCTGCTAATTGCTTGAAAAGTTGCAATGAGCAAATAGAAGAAAGTGAGAAGCATACTGCAAATTATGATACAGAGGAAAGAGTAGGATCTTCATCTTCTGAGTCTTGTGCTCAAGATCTTCCTGTGCTAGTTGGTGAGGAAGGGGAAGTTAAAAAACTCGAGAATACAGGTATAGAGGCTAATGTTTTGTGTTTGGAAAGTGAGATTTCTGAAAATATTCTTGAAAAAGGAGGTGATCCATTGGAAAAGCAAGACCAGATATCTGGACTTTCACAATCAGAGGTAAAGACAGATGTATGTACAGTTCATCTTCCAAATGATTTTCCTACATGTTTAACATCTGAAAGCAAAGTGTACCAACCTGTATCTTGTCCCCTAAGTGACTTATCTGAGAATGTAGAGTCAGTGGTTAATGAAGAAAAAATAACAGAGAGTTCCCTAGTAGAAATTACTGAACATAAAGATTTTACACTAAAAACAGAGGAGCTTATAGAGAGCCCCAAGTTAGAATCTTCTGAGGGTGAAATTATACAGACAGTGGACAGACAATCTGTTAAGAGCCCAGAGGTTCAATTGCTTGGGCATGTTGAAACTGAAGATGTAGAAATAATTGCAACATGTGATACTTTTGGGAATGAAGATTTCAATAATATTCAAGACTCTGAAAATAACTTACTAAAAAATAATCTTCTGAACACCAAATTGGAAAAATCTTTAGAAGAAAAGAATGAATCGCTGACCGAACATCCTAGATCTACAGAGTTGCCTAAAACACACATTGAACAGATTCAGAAGCATTTTAGTGAGGACAACAATGAAATGATACCTATGGAGTGTGATTCATTTTGCAGTGACCAAAATGAATCTGAAGTTGAACCATCTGTAAATGCTGATCTTAAACAAATGAATGAAAATTCTGTGACACACTGTTCTGAAAATAATATGCCGTCTTCTGATCTTGCGGATGAAAAGGTTGAAACTGTTTCTCAACCATCTGAAAGCCCAAAAGATACCATAGATAAAACCAAAAAGCCTCGTACTCGAAGATCTAGATTTCATTCTCCATCTACAACTTGGTCACCCAACAAAGACACTCCACAAGAAAAGAAGCGGCCCCAGTCTCCATCTCCCAGAAGAGAAACTGGGAAAGAAAGCAGGAAGTCTCAATCACCATCTCCTAAGAATGAGTCAGCCAGAGGCCGGAAAAAATCCCGTTCTCAGTCCCCAAAAAAGGATATTGCAAGAGAAAGGAGGCAATCTCAGTCTCGGTCTCCAAAAAGGGATACTACTAGGGAAAGCAGAAGATCTGAATCACTGTCCCCAAGAAGAGAAACTTCTAGAGAGAACAAAAGATCTCAGCCAAGAGTGAAAGATTCTTCCCCAGGAGAAAAATCCAGGTCCCAGAGCAGAGAACGAGAAAGTGATAGAGATGGGCAGAGGAGAGAGAGAGAAAGGAGAACCAGAAAGTGGTCTAGGTCCAGATCTCATTCTAGGTCCCCCTCAAGATGTAGAACAAAAAGTAAGAGTTCATCATTTGGTAGAATTGACAGAGATAGTTACTCTCCCCGGTGGAAGGGAAGATGGGCAAATGATGGTTGGAGATGTCCACGAGGAAATGATCGGTACAGAAAGAATGACCCAGAGAAACAGAATGAAAATACAAGAAAAGAAAAAAATGACATCCATCTAGATGCTGATGATCCAAATTCTGCTGACAAACATAGAAATGACTGTCCCAATTGGATAACAGAAAAAATAAACTCTGGGCCTGATCCAAGAACCAGAAATCCAGAAAAGTTGAAAGAGTCTCATTGGGAAGAAAATAGAAATGAAAATTCAGGAAATTCTTGGAATAAAAACTTTGGTTCTGGTTGGGTATCTAACCGTGGTAGAGGCAGAGGCAACCGTGGCAGAGGCACTTACAGAAGTAGTTTTGCCTATAAAGATCAGAATGAAAATCGGTGGCAAAATCGAAAACCCCTCTCAGGGAATTCAAACAGTTCAGGGAGTGAATCTTTCAAGTTTGTGGAACAGCAATCCTATAAGCGAAAAAGTGAACAGGAGTTCTCATTTGATACACCAGCAGATAGATCTGGATGGACATCTGCATCCAGCTGGGCCGTGAGAAAGACTTTGCCAGCAGATGTACAAAACTACTACTCACGACGAGGCAGAAATTCTTCAGGTCCACAGTCTGGATGGATGAAACAAGAGGAGGAAACATCTGGACAGGATTCTAGCCTAAAAGACCAAACAAACCAGCAAGTTGATGGTTCTCAGCTACCTATAAATATGATGCAACCGCAAATGAATGTAATGCAGCAACAAATGAATGCACAACACCAGCCTATGAATATCTTCCCATATCCAGTGGGTGTTCATGCTCCTTTGATGAACATCCAACGCAATCCATTTAACATTCATCCTCAGCTACCCTTGCATCTCCACACAGGAGTGCCCCTCATGCAGGTAGCCACTCCTACCAGTGTATCTCAGGGACTACCACCACCACCACCCCCTCCCCCACCATCCCAACAAGTCAACTACATTGCTTCACAACCAGATGGAAAGCAATTGCAGGGTATTCCTAGTTCTTCTCATGTAAGTAATAACATGAGTACACCAGTTTTGCCTGCTCCGACAGCAGCCCCAGGAAATACGGGAATGGTTCAGGGACCAAGTTCTGGTAATACTTCGTCATCAAGTCACAGCAAAGCCTCTAATGCTGCTGTAAAATTGGCAGAAAGCAAAGTAAGTGTTGCAGTGGAAGCCAGCGCAGATAGCTCGAAGACAGACAAGAAATTGCAAATTCAAGAAAAAGCAGCACAAGAGGTAAAATTGGCCATCAAGCCATTTTACCAAAATAAAGATATCACCAAGGAAGAATATAAAGAAATTGTACGGAAAGCAGTAGATAAAGTTTGTCATAGTAAGAGTGGAGAAGTAAATTCTACTAAAGTGGCAAATCTGGTTAAAGCCTATGTAGACAAATACAAATATTCACGGAAGGGGAGCCAAAAGAAAACTCTGGAAGAACCTGTGTCTACTGAAAAAAACATAGGCTGA
Amino sequence
MKKKTVCTLNMGDKKYEDMEGEENGDNTISTGLLYSEADRCPICLNCLLEKEVGFPESCNHVFCMTCILKWAETLASCPIDRKPFQAVFKFSALEGYVKVQVKKQLRETKDKKNENSFEKQVSCHENSKSCIRRKAIVREDLLSAKVCDLKWIHRNSLYSETGGKKNAAIKINKPQRSNWSTNQCFRNFFSNMFSSVSHSGESSFTYRAYCTEFIEASEISALIRQKRHELELSWFPDTLPGIGRIGFIPWNVETEVLPLISSVLPRTIFPTSTISFEHFGTSCKGYALAHTQEGEEKKQTSGTSNTRGSRRKPAMTTPTRRSTRNTRAETASQSQRSPISDNSGCDAPGNSNPSLSVPSSAESEKQTRQAPKRKSVRRGRKPPLLKKKLRSSVAAPEKSSSNDSVDEETAESDTSPVLEKEHQPDVDSSNICTVQTHVENQSANCLKSCNEQIEESEKHTANYDTEERVGSSSSESCAQDLPVLVGEEGEVKKLENTGIEANVLCLESEISENILEKGGDPLEKQDQISGLSQSEVKTDVCTVHLPNDFPTCLTSESKVYQPVSCPLSDLSENVESVVNEEKITESSLVEITEHKDFTLKTEELIESPKLESSEGEIIQTVDRQSVKSPEVQLLGHVETEDVEIIATCDTFGNEDFNNIQDSENNLLKNNLLNTKLEKSLEEKNESLTEHPRSTELPKTHIEQIQKHFSEDNNEMIPMECDSFCSDQNESEVEPSVNADLKQMNENSVTHCSENNMPSSDLADEKVETVSQPSESPKDTIDKTKKPRTRRSRFHSPSTTWSPNKDTPQEKKRPQSPSPRRETGKESRKSQSPSPKNESARGRKKSRSQSPKKDIARERRQSQSRSPKRDTTRESRRSESLSPRRETSRENKRSQPRVKDSSPGEKSRSQSRERESDRDGQRRERERRTRKWSRSRSHSRSPSRCRTKSKSSSFGRIDRDSYSPRWKGRWANDGWRCPRGNDRYRKNDPEKQNENTRKEKNDIHLDADDPNSADKHRNDCPNWITEKINSGPDPRTRNPEKLKESHWEENRNENSGNSWNKNFGSGWVSNRGRGRGNRGRGTYRSSFAYKDQNENRWQNRKPLSGNSNSSGSESFKFVEQQSYKRKSEQEFSFDTPADRSGWTSASSWAVRKTLPADVQNYYSRRGRNSSGPQSGWMKQEEETSGQDSSLKDQTNQQVDGSQLPINMMQPQMNVMQQQMNAQHQPMNIFPYPVGVHAPLMNIQRNPFNIHPQLPLHLHTGVPLMQVATPTSVSQGLPPPPPPPPPSQQVNYIASQPDGKQLQGIPSSSHVSNNMSTPVLPAPTAAPGNTGMVQGPSSGNTSSSSHSKASNAAVKLAESKVSVAVEASADSSKTDKKLQIQEKAAQEVKLAIKPFYQNKDITKEEYKEIVRKAVDKVCHSKSGEVNSTKVANLVKAYVDKYKYSRKGSQKKTLEEPVSTEKNIG*