ENST00000552546.5 TMEM106C
Information
- Transcript ID
- ENST00000552546.5
- Genome
- hg19
- Position
- chr12:48,357,390-48,362,159
- Strand
- +
- CDS length
- 540
- Amino acid length
- 180
- Gene symbol
- TMEM106C
- Gene type
- protein-coding
- Gene description
- transmembrane protein 106C
- Gene Entrez Gene ID
- 79022
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 48,357,390 | 48,357,416 |
| 2 | 48,357,992 | 48,358,097 |
| 3 | 48,359,661 | 48,359,780 |
| 4 | 48,359,872 | 48,360,012 |
| 5 | 48,360,466 | 48,360,515 |
| 6 | 48,360,991 | 48,361,044 |
| 7 | 48,361,916 | 48,362,159 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 48,358,020 | 48,358,097 |
| 3 | CDS | 48,359,661 | 48,359,780 |
| 4 | CDS | 48,359,872 | 48,360,012 |
| 5 | CDS | 48,360,466 | 48,360,515 |
| 6 | CDS | 48,360,991 | 48,361,044 |
| 7 | CDS | 48,361,916 | 48,362,012 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 47,963,607 | 47,968,376 | Link |
CDS sequence
ATGGGGTCTCAGCATTCCGCTGCTGCTCGCCCCTCCTCCTGCAGGCGAAAGCAAGAAGATGACAGGGACGGTTTGCTGGCATCTGGTTTGGTGGTTTTCTTCCTGTTTCCGCATTCAGTCCTTGTGGATGATGACGGCATCAAAGTGGTGAAAGTCACATTTAATAAGCAAGACTCCCTTGTAATTCTCACCATCATGGCCACCCTGAAAATCAGGAACTCCAACTTCTACACGGTGGCAGTGACCAGCCTGTCCAGCCAGATTCAGTACATGAACACAGTGGTCAGTACATATGTGACTACTAACGTCTCCCTTATTCCACCTCGGAGTGAGCAACTGGTGAATTTTACCGGGAAGGCCGAGATGGGAGGACCGTTTTCCTATGTGTACTTCTTCTGCACGGTACCTGAGATCCTGGTGCACAACATAGTGATCTTCATGCGAACTTCAGTGAAGATTTCATACATTGGCCTCATGACCCAGAGCTCCTTGGAGACACATCACTATGTGGATTGTGGAGGAAATTCCACAGCTATTTAA
Amino sequence
MGSQHSAAARPSSCRRKQEDDRDGLLASGLVVFFLFPHSVLVDDDGIKVVKVTFNKQDSLVILTIMATLKIRNSNFYTVAVTSLSSQIQYMNTVVSTYVTTNVSLIPPRSEQLVNFTGKAEMGGPFSYVYFFCTVPEILVHNIVIFMRTSVKISYIGLMTQSSLETHHYVDCGGNSTAI*