ENST00000541216.1 RAP1B
Information
- Transcript ID
- ENST00000541216.1
- Genome
- hg19
- Position
- chr12:69,004,805-69,050,417
- Strand
- +
- CDS length
- 540
- Amino acid length
- 180
- Gene symbol
- RAP1B
- Gene type
- protein-coding
- Gene description
- RAP1B, member of RAS oncogene family
- Gene Entrez Gene ID
- 5908
Variants
Display target variant
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Variant name | Gene | AA change | CDS | Japanese frequency |
TogoVar | MGeND | Genome | ClinVar | CIViC evidence | DisGeNET entry | COSMIC occurrence |
Prediction | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | Entry | Origin | Annotation | |||||||||||
Search Word
| Target data | : |
MGeND data only
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| Category | : |
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| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Size | Chromosome | Start | Stop | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | ||||||||||||||
Search Word
| Target data | : |
MGeND data only
|
| Category | : |
|
| Search word | : | |
| Filtering | : |
| Name | MGeND | Type | Genome | Gene symbol | Chromosome | Genomic start | Genomic stop | Strand | Ref | Alt | ClinVar | Origin | Entry | CIViC evidence | DisGeNET entry | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Entry | Origin | Type | Annotation | |||||||||||||||
Exon
| Exon number | Start | Stop |
|---|---|---|
| 1 | 69,004,805 | 69,004,823 |
| 2 | 69,042,479 | 69,042,561 |
| 3 | 69,044,180 | 69,044,248 |
| 4 | 69,045,775 | 69,045,831 |
| 5 | 69,047,892 | 69,048,032 |
| 6 | 69,050,086 | 69,050,417 |
CDS
| Exon number | Type | Start | Stop |
|---|---|---|---|
| 2 | CDS | 69,042,505 | 69,042,561 |
| 3 | CDS | 69,044,180 | 69,044,248 |
| 4 | CDS | 69,045,775 | 69,045,831 |
| 5 | CDS | 69,047,892 | 69,048,032 |
| 6 | CDS | 69,050,086 | 69,050,301 |
Other genome
| Genome | Chromosome | Start | End | Links |
|---|---|---|---|---|
| hg38 | chr12 | 68,611,025 | 68,656,637 | Link |
CDS sequence
ATGCGTGAGTATAAGCTAGTCGTTCTTGGCTCAGGAGGCGTTGGAAAGTCTGCTTTGACTGTACAATTTGTTCAAGGAATTTTTGTAGAAAAATACGATCCTACGATAGAAGATTCTTATAGAAAGCAAGTTGAAGTAGATGCACAACAGTGTATGCTTGAAATCTTGGATACTGCAGGAACGGAGCAATTTACAGCAATGAGGGATTTATACATGAAAAATGGACAAGGATTTGCATTAGTTTATTCCATCACAGCACAGTCCACATTTAACGATTTACAAGACCTGAGAGAACAGATTCTTCGAGTTAAAGACACTGATGATGTTCCAATGATTCTTGTTGGTAATAAGTGTGACTTGGAAGATGAAAGAGTTGTAGGGAAGGAACAAGGTCAAAATCTAGCAAGACAATGGAACAACTGTGCATTCTTAGAATCTTCTGCAAAATCAAAAATAAATGTTAATGAGGTATGGTCAAATATACTTAAAATGGGTCTTCATTTGAAGTACAACATTGAAGATGAATGGAAAATGTCTTAA
Amino sequence
MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEVWSNILKMGLHLKYNIEDEWKMS*