ENST00000340473.8 GTF2F2

Information
Transcript ID
ENST00000340473.8
Genome
hg19
Position
chr13:45,694,645-45,859,028
Strand
+
CDS length
750
Amino acid length
250
Gene symbol
GTF2F2
Gene type
protein-coding
Gene description
general transcription factor IIF subunit 2
Gene Entrez Gene ID
2963
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 45,694,645 45,694,856
2 45,710,868 45,710,941
3 45,723,905 45,723,923
4 45,725,822 45,725,966
5 45,781,559 45,781,640
6 45,827,006 45,827,105
7 45,841,368 45,841,511
8 45,857,577 45,859,028
CDS
Exon number Type Start Stop
1 CDS 45,694,791 45,694,856
2 CDS 45,710,868 45,710,941
3 CDS 45,723,905 45,723,923
4 CDS 45,725,822 45,725,966
5 CDS 45,781,559 45,781,640
6 CDS 45,827,006 45,827,105
7 CDS 45,841,368 45,841,511
8 CDS 45,857,577 45,857,696
Other genome
Genome Chromosome Start End Links
hg38 chr13 45,120,510 45,284,893 Link
CDS sequence
ATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAACAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAATGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTGCGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAGGATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCTTCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGACAGACATTAACAGTATTTACTGAGAGCTCATCAGATAAGCTGTCATTGGAAGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCCAGTGAAAACTACATGCGATTAAAAAGATTGCAAATAGAAGAGTCTTCCAAACCAGTGAGGCTATCACAACAGCTGGACAAAGTTGTAACAACCAATTACAAACCTGTTGCTAATCATCAATACAATATCGAATATGAAAGGAAAAAGAAAGAAGACGGAAAGCGAGCTCGAGCTGATAAACAACATGTTTTAGACATGCTATTTTCAGCCTTTGAGAAACATCAATACTATAATCTTAAGGACTTGGTGGACATCACAAAGCAACCTGTGGTGTACCTGAAGGAAATCTTAAAAGAAATTGGTGTTCAGAATGTAAAAGGGATCCACAAAAACACATGGGAGCTGAAGCCAGAGTACAGACACTATCAAGGAGAAGAAAAGAGTGACTAA
Amino sequence
MAERGELDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPREHPFVLQSVGGQTLTVFTESSSDKLSLEGIVVQRAECRPAASENYMRLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANHQYNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVVYLKEILKEIGVQNVKGIHKNTWELKPEYRHYQGEEKSD*