ENST00000340473.8 GTF2F2

Information
Transcript ID
ENST00000340473.8
Genome
hg38
Position
chr13:45,120,510-45,284,893
Strand
+
CDS length
750
Amino acid length
250
Gene symbol
GTF2F2
Gene type
protein-coding
Gene description
general transcription factor IIF subunit 2
Gene Entrez Gene ID
2963
Variants

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Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
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Target data :
MGeND data only
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Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 45,120,510 45,120,721
2 45,136,733 45,136,806
3 45,149,770 45,149,788
4 45,151,687 45,151,831
5 45,207,424 45,207,505
6 45,252,871 45,252,970
7 45,267,233 45,267,376
8 45,283,442 45,284,893
CDS
Exon number Type Start Stop
1 CDS 45,120,656 45,120,721
2 CDS 45,136,733 45,136,806
3 CDS 45,149,770 45,149,788
4 CDS 45,151,687 45,151,831
5 CDS 45,207,424 45,207,505
6 CDS 45,252,871 45,252,970
7 CDS 45,267,233 45,267,376
8 CDS 45,283,442 45,283,561
Other genome
Genome Chromosome Start End Links
hg19 chr13 45,694,645 45,859,028 Link
CDS sequence
ATGGCCGAGCGCGGGGAACTCGACTTGACCGGCGCCAAACAGAACACAGGAGTGTGGCTAGTCAAGGTTCCTAAATATTTGTCACAGCAATGGGCTAAAGCCTCTGGAAGAGGTGAAGTTGGGAAACTGCGGATTGCCAAGACTCAAGGAAGGACTGAGGTGTCATTTACTTTGAATGAGGATCTTGCAAATATTCATGATATTGGTGGAAAACCAGCTTCAGTCAGTGCTCCTAGAGAACATCCATTTGTCTTGCAAAGTGTTGGAGGACAGACATTAACAGTATTTACTGAGAGCTCATCAGATAAGCTGTCATTGGAAGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCCAGTGAAAACTACATGCGATTAAAAAGATTGCAAATAGAAGAGTCTTCCAAACCAGTGAGGCTATCACAACAGCTGGACAAAGTTGTAACAACCAATTACAAACCTGTTGCTAATCATCAATACAATATCGAATATGAAAGGAAAAAGAAAGAAGACGGAAAGCGAGCTCGAGCTGATAAACAACATGTTTTAGACATGCTATTTTCAGCCTTTGAGAAACATCAATACTATAATCTTAAGGACTTGGTGGACATCACAAAGCAACCTGTGGTGTACCTGAAGGAAATCTTAAAAGAAATTGGTGTTCAGAATGTAAAAGGGATCCACAAAAACACATGGGAGCTGAAGCCAGAGTACAGACACTATCAAGGAGAAGAAAAGAGTGACTAA
Amino sequence
MAERGELDLTGAKQNTGVWLVKVPKYLSQQWAKASGRGEVGKLRIAKTQGRTEVSFTLNEDLANIHDIGGKPASVSAPREHPFVLQSVGGQTLTVFTESSSDKLSLEGIVVQRAECRPAASENYMRLKRLQIEESSKPVRLSQQLDKVVTTNYKPVANHQYNIEYERKKKEDGKRARADKQHVLDMLFSAFEKHQYYNLKDLVDITKQPVVYLKEILKEIGVQNVKGIHKNTWELKPEYRHYQGEEKSD*