ENST00000377942.7 PCDH8

Information
Transcript ID
ENST00000377942.7
Genome
hg19
Position
chr13:53,417,024-53,422,775
Strand
-
CDS length
3,213
Amino acid length
1,071
Gene symbol
PCDH8
Gene type
protein-coding
Gene description
protocadherin 8
Gene Entrez Gene ID
5100
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 53,417,024 53,419,068
2 53,419,560 53,419,767
1 53,419,941 53,422,775
CDS
Exon number Type Start Stop
3 CDS 53,418,695 53,419,068
2 CDS 53,419,560 53,419,767
1 CDS 53,419,941 53,422,571
Other genome
Genome Chromosome Start End Links
hg38 chr13 52,842,889 52,848,640 Link
CDS sequence
ATGAGTCCTGTGAGGCGTTGGGGCAGCCCCTGCCTTTTCCCCTTGCAGCTCTTCAGCCTCTGCTGGGTGCTCTCAGTGGCCCAGAGCAAAACAGTCCGATACAGCACCTTCGAGGAGGATGCCCCCGGCACGGTCATCGGGACCCTGGCCGAGGACCTGCATATGAAAGTATCGGGTGACACAAGCTTCCGCCTGATGAAGCAATTCAACAGCTCTCTGCTCCGGGTGCGCGAAGGCGACGGGCAGCTGACCGTCGGGGACGCCGGCCTGGACCGCGAGCGGCTGTGTGGCCAGGCCCCGCAGTGCGTGCTGGCCTTCGATGTGGTCAGCTTCTCGCAGGAGCAGTTCCGGCTGGTGCACGTGGAGGTAGAGGTGAGGGACGTCAACGACCACGCGCCGCGCTTCCCCAGGGCCCAGATCCCGGTAGAGGTGTCCGAGGGTGCGGCAGTGGGCACGCGCATCCCCTTGGAGGTGCCGGTGGACGAGGACGTGGGCGCCAACGGGCTGCAGACCGTGCGCCTGGCCGAGCCGCACAGCCCCTTTCGCGTGGAGCTGCAGACGCGAGCGGACGGCGCTCAGTGCGCAGACCTGGTGCTGCTGCAGGAGCTGGACCGCGAGAGCCAGGCCGCCTACAGCCTGGAGCTGGTGGCCCAGGACGGCGGCCGCCCGCCGCGCTCCGCCACGGCTGCCCTCAGCGTGCGCGTCCTGGATGCGAATGACCACAGCCCGGCCTTCCCGCAGGGCGCCGTGGCCGAAGTGGAGCTGGCGGAAGACGCGCCCGTGGGCTCCCTGCTTCTCGACCTGGACGCAGCCGACCCCGACGAGGGACCTAACGGCGACGTGGTGTTCGCATTTGGCGCCCGCACCCCGCCGGAGGCGCGCCGCCTCTTTCGGCTTGACCCGCGATCAGGCCGCCTCACCCTGGCCGGGCCCGTGGACTACGAGCGTCAGGACACCTACGAGCTGGACGTGCGGGCGCAGGACCGCGGACCCGGGCCCCGCGCTGCCACCTGCAAGGTCATCGTGCGCATCCGAGACGTCAATGACAACGCACCCGACATCGCCATCACCCCGCTGGCCGCCCCAGGCGCGCCGGCAACCTCACCCTTCGCCGCTGCCGCCGCCGCCGCTGCACTCGGGGGAGCGGACGCTAGCTCGCCGGCGGGAGCCGGGACGCCGGAGGCTGGTGCCACTTCGCTGGTGCCGGAGGGGGCGGCGCGCGAGAGCCTGGTGGCCCTGGTCAGCACCTCGGACAGGGACTCGGGCGCCAACGGGCAAGTGCGCTGCGCCCTCTATGGGCACGAGCACTTCCGGCTGCAGCCGGCCTACGCGGGCAGCTACCTGGTGGTGACCGCGGCGTCGCTGGACCGCGAACGCATCGCCGAGTACAACTTGACGCTGGTGGCCGAGGATCGCGGCGCGCCCCCGCTGCGCACAGTGCGGCCCTACACGGTGCGTGTGGGCGACGAGAACGACAACGCGCCGCTCTTCACGCGGCCGGTCTATGAGGTGTCGGTGCGCGAGAACAACCCGCCAGGCGCCTACCTGGCCACGGTGGCCGCCCGCGACCGGGACCTGGGCCGCAACGGCCAGGTCACCTACCGGCTGCTGGAGGCCGAGGTGGGCCGCGCCGGGGGCGCCGTGTCCACTTATGTCTCGGTGGACCCAGCTACCGGAGCCATCTACGCGCTGCGCAGCTTCGACTATGAGACGCTGCGCCAACTCGACGTTCGCATCCAAGCTAGCGACGGCGGCTCCCCTCAGCTTTCCAGCAGCGCCCTAGTGCAAGTGCGCGTGCTGGACCAGAACGACCATGCGCCAGTCCTGGTGCACCCGGCGCCAGCCAATGGCTCCCTAGAAGTGGCGGTGCCTGGGCGCACCGCAAAGGACACGGTTGTGGCCCGTGTGCAGGCCCGGGATGCAGACGAGGGAGCCAACGGGGAGCTGGCGTTCGAGCTGCAGCAGCAGGAGCCGCGCGAAGCCTTCGCCATCGGCCGCCGCACGGGGGAGATACTGCTCACCGGCGACCTCTCGCAGGAGCCACCCGGTCGCGTGTTCAGGGCGCTCCTGGTCATATCCGACGGCGGCCGTCCCCCGCTCACCACCACCGCAACTGTCAGCTTCGTGGTAACAGCAGGGGGCGGGCGTGGGCCGGCTGCGCCTGCCAGTGCAGGAAGCCCGGAGCGTTCCCGCCCGCCTGGCTCTCGGCTCGGGGTGTCCGGGTCGGTGCTGCAATGGGACACGCCGCTGATCGTCATCATCGTGCTGGCCGGGAGCTGCACGCTGCTGCTGGCCGCCATCATCGCCATCGCCACCACCTGCAACCGCCGCAAGAAGGAGGTGCGCAAAGGGGGGGCCCTCCGGGAAGAGCGGCCCGGGGCGGCGGGCGGCGGAGCCTCGGCTCCCGGCTCCCCGGAGGAGGCCGCCCGGGGAGCCGGGCCCAGGCCCAACATGTTCGACGTGCTCACCTTCCCTGGCACCGGCAAAGCGCCCTTTGGCAGCCCCGCGGCGGACGCGCCTCCGCCTGCGGTCGCCGCGGCCGAAGTGCCGGGCTCAGAGGGCGGCAGCGCCACTGGGGAAAGCGCCTGTCACTTCGAGGGGCAGCAGCGGCTCCGCGGCGCGCACGCCGAGCCCTACGGTGCCTCCCCGGGTTTTGGAAAGGAGCCGGCGCCCCCTGTGGCGGTGTGGAAAGGACACTCCTTCAACACCATTTCTGGCAGAGAAGCAGAGAAGTTCAGCGGCAAAGACAGCGGTAAAGGGGACAGTGATTTCAACGACAGCGATTCCGACATCAGCGGGGACGCTCTGAAAAAGGATCTCATCAACCACATGCAGAGTGGACTGTGGGCGTGCACCGCTGAGTGTAAGATCCTGGGCCACTCTGACCGCTGCTGGAGCCCATCCTGCAGCGGGCCCAACGCACATCCATCGCCTCACCCACCAGCCCAGATGTCAACCTTCTGTAAGAGCACGTCACTGCCTCGGGATCCTCTGCGCAGGGACAATTACTACCAGGCCCAGCTGCCCAAGACAGTGGGGCTGCAGAGCGTCTATGAGAAAGTACTGCACAGAGACTATGACAGGACAGTCACTCTGCTCTCCCCTCCCCGTCCAGGGAGGCTCCCAGACCTGCAGGAGATTGGAGTACCCCTCTACCAGTCCCCTCCTGGCAGGTACCTGTCCCCGAAGAAGGGAGCCAATGAAAATGTGTAA
Amino sequence
MSPVRRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGDTSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLVHVEVEVRDVNDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDEDVGANGLQTVRLAEPHSPFRVELQTRADGAQCADLVLLQELDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFAFGARTPPEARRLFRLDPRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRAATCKVIVRIRDVNDNAPDIAITPLAAPGAPATSPFAAAAAAAALGGADASSPAGAGTPEAGATSLVPEGAARESLVALVSTSDRDSGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENNPPGAYLATVAARDRDLGRNGQVTYRLLEAEVGRAGGAVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRVLDQNDHAPVLVHPAPANGSLEVAVPGRTAKDTVVARVQARDADEGANGELAFELQQQEPREAFAIGRRTGEILLTGDLSQEPPGRVFRALLVISDGGRPPLTTTATVSFVVTAGGGRGPAAPASAGSPERSRPPGSRLGVSGSVLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKEVRKGGALREERPGAAGGGASAPGSPEEAARGAGPRPNMFDVLTFPGTGKAPFGSPAADAPPPAVAAAEVPGSEGGSATGESACHFEGQQRLRGAHAEPYGASPGFGKEPAPPVAVWKGHSFNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILGHSDRCWSPSCSGPNAHPSPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYEKVLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYQSPPGRYLSPKKGANENV*