ENST00000377942.7 PCDH8

Information
Transcript ID
ENST00000377942.7
Genome
hg38
Position
chr13:52,842,889-52,848,640
Strand
-
CDS length
3,213
Amino acid length
1,071
Gene symbol
PCDH8
Gene type
protein-coding
Gene description
protocadherin 8
Gene Entrez Gene ID
5100
Variants

Display target variant


Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
3 52,842,889 52,844,933
2 52,845,425 52,845,632
1 52,845,806 52,848,640
CDS
Exon number Type Start Stop
3 CDS 52,844,560 52,844,933
2 CDS 52,845,425 52,845,632
1 CDS 52,845,806 52,848,436
Other genome
Genome Chromosome Start End Links
hg19 chr13 53,417,024 53,422,775 Link
CDS sequence
ATGAGTCCTGTGAGGCGTTGGGGCAGCCCCTGCCTTTTCCCCTTGCAGCTCTTCAGCCTCTGCTGGGTGCTCTCAGTGGCCCAGAGCAAAACAGTCCGATACAGCACCTTCGAGGAGGATGCCCCCGGCACGGTCATCGGGACCCTGGCCGAGGACCTGCATATGAAAGTATCGGGTGACACAAGCTTCCGCCTGATGAAGCAATTCAACAGCTCTCTGCTCCGGGTGCGCGAAGGCGACGGGCAGCTGACCGTCGGGGACGCCGGCCTGGACCGCGAGCGGCTGTGTGGCCAGGCCCCGCAGTGCGTGCTGGCCTTCGATGTGGTCAGCTTCTCGCAGGAGCAGTTCCGGCTGGTGCACGTGGAGGTAGAGGTGAGGGACGTCAACGACCACGCGCCGCGCTTCCCCAGGGCCCAGATCCCGGTAGAGGTGTCCGAGGGTGCGGCAGTGGGCACGCGCATCCCCTTGGAGGTGCCGGTGGACGAGGACGTGGGCGCCAACGGGCTGCAGACCGTGCGCCTGGCCGAGCCGCACAGCCCCTTTCGCGTGGAGCTGCAGACGCGAGCGGACGGCGCTCAGTGCGCAGACCTGGTGCTGCTGCAGGAGCTGGACCGCGAGAGCCAGGCCGCCTACAGCCTGGAGCTGGTGGCCCAGGACGGCGGCCGCCCGCCGCGCTCCGCCACGGCTGCCCTCAGCGTGCGCGTCCTGGATGCGAATGACCACAGCCCGGCCTTCCCGCAGGGCGCCGTGGCCGAAGTGGAGCTGGCGGAAGACGCGCCCGTGGGCTCCCTGCTTCTCGACCTGGACGCAGCCGACCCCGACGAGGGACCTAACGGCGACGTGGTGTTCGCATTTGGCGCCCGCACCCCGCCGGAGGCGCGCCGCCTCTTTCGGCTTGACCCGCGATCAGGCCGCCTCACCCTGGCCGGGCCCGTGGACTACGAGCGTCAGGACACCTACGAGCTGGACGTGCGGGCGCAGGACCGCGGACCCGGGCCCCGCGCTGCCACCTGCAAGGTCATCGTGCGCATCCGAGACGTCAATGACAACGCACCCGACATCGCCATCACCCCGCTGGCCGCCCCAGGCGCGCCGGCAACCTCACCCTTCGCCGCTGCCGCCGCCGCCGCTGCACTCGGGGGAGCGGACGCTAGCTCGCCGGCGGGAGCCGGGACGCCGGAGGCTGGTGCCACTTCGCTGGTGCCGGAGGGGGCGGCGCGCGAGAGCCTGGTGGCCCTGGTCAGCACCTCGGACAGGGACTCGGGCGCCAACGGGCAAGTGCGCTGCGCCCTCTATGGGCACGAGCACTTCCGGCTGCAGCCGGCCTACGCGGGCAGCTACCTGGTGGTGACCGCGGCGTCGCTGGACCGCGAACGCATCGCCGAGTACAACTTGACGCTGGTGGCCGAGGATCGCGGCGCGCCCCCGCTGCGCACAGTGCGGCCCTACACGGTGCGTGTGGGCGACGAGAACGACAACGCGCCGCTCTTCACGCGGCCGGTCTATGAGGTGTCGGTGCGCGAGAACAACCCGCCAGGCGCCTACCTGGCCACGGTGGCCGCCCGCGACCGGGACCTGGGCCGCAACGGCCAGGTCACCTACCGGCTGCTGGAGGCCGAGGTGGGCCGCGCCGGGGGCGCCGTGTCCACTTATGTCTCGGTGGACCCAGCTACCGGAGCCATCTACGCGCTGCGCAGCTTCGACTATGAGACGCTGCGCCAACTCGACGTTCGCATCCAAGCTAGCGACGGCGGCTCCCCTCAGCTTTCCAGCAGCGCCCTAGTGCAAGTGCGCGTGCTGGACCAGAACGACCATGCGCCAGTCCTGGTGCACCCGGCGCCAGCCAATGGCTCCCTAGAAGTGGCGGTGCCTGGGCGCACCGCAAAGGACACGGTTGTGGCCCGTGTGCAGGCCCGGGATGCAGACGAGGGAGCCAACGGGGAGCTGGCGTTCGAGCTGCAGCAGCAGGAGCCGCGCGAAGCCTTCGCCATCGGCCGCCGCACGGGGGAGATACTGCTCACCGGCGACCTCTCGCAGGAGCCACCCGGTCGCGTGTTCAGGGCGCTCCTGGTCATATCCGACGGCGGCCGTCCCCCGCTCACCACCACCGCAACTGTCAGCTTCGTGGTAACAGCAGGGGGCGGGCGTGGGCCGGCTGCGCCTGCCAGTGCAGGAAGCCCGGAGCGTTCCCGCCCGCCTGGCTCTCGGCTCGGGGTGTCCGGGTCGGTGCTGCAATGGGACACGCCGCTGATCGTCATCATCGTGCTGGCCGGGAGCTGCACGCTGCTGCTGGCCGCCATCATCGCCATCGCCACCACCTGCAACCGCCGCAAGAAGGAGGTGCGCAAAGGGGGGGCCCTCCGGGAAGAGCGGCCCGGGGCGGCGGGCGGCGGAGCCTCGGCTCCCGGCTCCCCGGAGGAGGCCGCCCGGGGAGCCGGGCCCAGGCCCAACATGTTCGACGTGCTCACCTTCCCTGGCACCGGCAAAGCGCCCTTTGGCAGCCCCGCGGCGGACGCGCCTCCGCCTGCGGTCGCCGCGGCCGAAGTGCCGGGCTCAGAGGGCGGCAGCGCCACTGGGGAAAGCGCCTGTCACTTCGAGGGGCAGCAGCGGCTCCGCGGCGCGCACGCCGAGCCCTACGGTGCCTCCCCGGGTTTTGGAAAGGAGCCGGCGCCCCCTGTGGCGGTGTGGAAAGGACACTCCTTCAACACCATTTCTGGCAGAGAAGCAGAGAAGTTCAGCGGCAAAGACAGCGGTAAAGGGGACAGTGATTTCAACGACAGCGATTCCGACATCAGCGGGGACGCTCTGAAAAAGGATCTCATCAACCACATGCAGAGTGGACTGTGGGCGTGCACCGCTGAGTGTAAGATCCTGGGCCACTCTGACCGCTGCTGGAGCCCATCCTGCAGCGGGCCCAACGCACATCCATCGCCTCACCCACCAGCCCAGATGTCAACCTTCTGTAAGAGCACGTCACTGCCTCGGGATCCTCTGCGCAGGGACAATTACTACCAGGCCCAGCTGCCCAAGACAGTGGGGCTGCAGAGCGTCTATGAGAAAGTACTGCACAGAGACTATGACAGGACAGTCACTCTGCTCTCCCCTCCCCGTCCAGGGAGGCTCCCAGACCTGCAGGAGATTGGAGTACCCCTCTACCAGTCCCCTCCTGGCAGGTACCTGTCCCCGAAGAAGGGAGCCAATGAAAATGTGTAA
Amino sequence
MSPVRRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGDTSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLVHVEVEVRDVNDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDEDVGANGLQTVRLAEPHSPFRVELQTRADGAQCADLVLLQELDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFAFGARTPPEARRLFRLDPRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRAATCKVIVRIRDVNDNAPDIAITPLAAPGAPATSPFAAAAAAAALGGADASSPAGAGTPEAGATSLVPEGAARESLVALVSTSDRDSGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRPVYEVSVRENNPPGAYLATVAARDRDLGRNGQVTYRLLEAEVGRAGGAVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRVLDQNDHAPVLVHPAPANGSLEVAVPGRTAKDTVVARVQARDADEGANGELAFELQQQEPREAFAIGRRTGEILLTGDLSQEPPGRVFRALLVISDGGRPPLTTTATVSFVVTAGGGRGPAAPASAGSPERSRPPGSRLGVSGSVLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKEVRKGGALREERPGAAGGGASAPGSPEEAARGAGPRPNMFDVLTFPGTGKAPFGSPAADAPPPAVAAAEVPGSEGGSATGESACHFEGQQRLRGAHAEPYGASPGFGKEPAPPVAVWKGHSFNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILGHSDRCWSPSCSGPNAHPSPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYEKVLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYQSPPGRYLSPKKGANENV*