ENST00000466548.5 SLAIN1

Information
Transcript ID
ENST00000466548.5
Genome
hg19
Position
chr13:78,272,023-78,338,259
Strand
+
CDS length
1,707
Amino acid length
569
Gene symbol
SLAIN1
Gene type
protein-coding
Gene description
SLAIN motif family member 1
Gene Entrez Gene ID
122060
Variants

Display target variant


Search Word
Target data :
MGeND data only
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Variant name Gene AA change CDS Japanese
frequency		 TogoVar MGeND Genome ClinVar CIViC evidence DisGeNET entry COSMIC
occurrence		 Prediction
Entry Origin Type Annotation Entry Origin Annotation
Search Word
Target data :
MGeND data only
Category :
Search word :
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Name MGeND Type Genome Size Chromosome Start Stop Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Search Word
Target data :
MGeND data only
Category :
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Filtering :
Name MGeND Type Genome Gene symbol Chromosome Genomic start Genomic stop Strand Ref Alt ClinVar Origin Entry CIViC evidence DisGeNET entry
Entry Origin Type Annotation
Exon
Exon number Start Stop
1 78,272,023 78,272,338
2 78,272,405 78,272,674
3 78,293,667 78,293,806
4 78,318,418 78,318,567
5 78,320,649 78,320,990
6 78,327,338 78,327,493
7 78,334,963 78,335,245
8 78,337,280 78,338,259
CDS
Exon number Type Start Stop
1 CDS 78,272,049 78,272,338
2 CDS 78,272,405 78,272,674
3 CDS 78,293,667 78,293,806
4 CDS 78,318,418 78,318,567
5 CDS 78,320,649 78,320,990
6 CDS 78,327,338 78,327,493
7 CDS 78,334,963 78,335,245
8 CDS 78,337,280 78,337,355
Other genome
Genome Chromosome Start End Links
hg38 chr13 77,697,888 77,764,124 Link
CDS sequence
ATGATGGCGGAGCAGGTGAAATGCGCCTCGGCAGGGGTCAGCTCTGGAGCGGGCTCCGGGCCGGTGGTGAACGCGGAGCTGGAGGTGAAGAAGCTGCAGGAGCTGGTGCGCAAGCTGGAGAAGCAGAACGAGCAGCTGCGGAGTCGAGCGGCCAGCGCGGCCGCCGCCCCGCACCTGCTGCTGCTGCCGCCGCCGCCGCCCGCCGCGCCGCCCCCCGCTGGCCTGCAGCCTTTGGGTCCTCGGAGCCCCCCGGCCGCCACGGCCACCGCCGCGGCCTCAGGGGGCCTGGGCCCCGCGTTCCCGGGCACCTTCTGCCTGCCTAGCCCCGCGCCCTCCCTGCTTTGCAGCCTGGCGCAGCCACCCGAGGCGCCCTTCGTCTACTTCAAGCCGGCAGCAGGCTTCTTCGGCGCGGGCGGTGGCGGGCCGGAGCCGGGGGGCGCGGGGACGCCGCCAGGGGCAGCTGCAGCGCCGCCCTCGCCGCCCCCCACGCTGCTGGACGAGGTGGAATTGCTGGATCTGGAGAGCGTAGCCGCCTGGCGGGACGAGGACGACTACACCTGGTTATACATTGGCTCTTCAAAGACGTTCACCTCATCAGAGAAATCCCTGACTCCTTTGCAGTGGTGTAGACATGTCCTAGATAACCCAACTCCTGAGATGGAAGCAGCGAGACGTTCCCTGTGCTTTAGACTGGAGCAAGGTTACACTTCCAGGGGCTCCCCACTCAGTCCCCAGTCATCTATCGACAGTGAGCTGAGTACTTCAGAATTGGAGGATGATTCTATCTCCATGGGATATAAATTACAGGACCTCACTGATGTTCAGATCATGGCTCGTCTGCAAGAAGAAAGTCTCAGGCAAGATTATGCTTCTACTTCAGCATCTGTATCAAGACATAGTTCCAGTGTGTCATTGAGTTCAGGAAAAAAAGGGACATGTAGTGATCAAGAATATGACCAATACAGTCTGGAGGATGAAGAGGAATTTGATCATTTGCCACCACCTCAGCCTCGTCTTCCAAGATGTTCCCCTTTCCAAAGAGGAATTCCCCATTCACAGACTTTCTCCAGCATTCGGGAGTGTAGGAGGAGCCCCAGTTCCCAGTATTTTCCTTCAAATAATTACCAGCAGCAACAGTATTATTCACCTCAAGCCCAAACTCCAGATCAGCAACCAAATAGGACCAATGGAGATAAGCTCCGAAGAAGTATGCCTAACCTAGCCCGGATGCCAAGTACAACTGCCATTAGTAGCAACATTAGTTCTCCGGTCACCGTGCGAAATAGTCAGAGTTTTGACTCAAGCTTGCATGGAGCTGGAAATGGAATTTCAAGAATACAATCTTGTATTCCATCACCGGGACAGCTTCAACACAGGGTCCACAGCGTGGGGCATTTCCCAGTGTCTATCCGACAGCCTCTTAAAGCCACAGCCTATGTGAGTCCAACCGTTCAAGGCAGCAGTAACATGCCTTTATCAAACGGCTTACAGCTGTATTCCAACACAGGAATCCCCACACCGAACAAAGCTGCAGCTTCTGGGATAATGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAATAAATGGGAGTAACCTGCCTCGAAGCAAAATTGCACAACCTGTTAGAAGTTTTCTTCAGCCTCCAAAGCCTCTGTCTTCACTCAGCACTCTGAGGGATGGAAATTGGAGAGATGGTTGCTACTAA
Amino sequence
MMAEQVKCASAGVSSGAGSGPVVNAELEVKKLQELVRKLEKQNEQLRSRAASAAAAPHLLLLPPPPPAAPPPAGLQPLGPRSPPAATATAAASGGLGPAFPGTFCLPSPAPSLLCSLAQPPEAPFVYFKPAAGFFGAGGGGPEPGGAGTPPGAAAAPPSPPPTLLDEVELLDLESVAAWRDEDDYTWLYIGSSKTFTSSEKSLTPLQWCRHVLDNPTPEMEAARRSLCFRLEQGYTSRGSPLSPQSSIDSELSTSELEDDSISMGYKLQDLTDVQIMARLQEESLRQDYASTSASVSRHSSSVSLSSGKKGTCSDQEYDQYSLEDEEEFDHLPPPQPRLPRCSPFQRGIPHSQTFSSIRECRRSPSSQYFPSNNYQQQQYYSPQAQTPDQQPNRTNGDKLRRSMPNLARMPSTTAISSNISSPVTVRNSQSFDSSLHGAGNGISRIQSCIPSPGQLQHRVHSVGHFPVSIRQPLKATAYVSPTVQGSSNMPLSNGLQLYSNTGIPTPNKAAASGIMGRSALPRPSLAINGSNLPRSKIAQPVRSFLQPPKPLSSLSTLRDGNWRDGCY*